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Gene Expression Data
Assay Details
Assay
Reference: J:82114 Suto F, et al., Identification and characterization of a novel mouse plexin, plexin-A4. Mech Dev. 2003 Mar;120(3):385-96
Assay type: RNA in situ
MGI Accession ID: MGI:5588673
Gene symbol: Plxna4
Gene name: plexin A4
Probe: plexin-A4 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen not shown: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: dorsal root ganglion Present
TS16: trigeminal ganglion Present
TS16: peripheral nervous system Present Regionally restricted Expression was detected in the sympathetic ganglion.

Specimen 3A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: dorsal root ganglion Strong 3A
TS20: basal columns Present Regionally restricted 3A Expression was detected in a subset of motor neurons in the spinal cord.
TS20: alar columns Present Regionally restricted 3A Expression was detected in the dorsal horn.

Specimen 3B: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: trigeminal ganglion Strong 3B

Specimen 3C: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: inferior glossopharyngeal ganglion Strong 3C
TS24: inferior vagus ganglion Strong 3C
TS24: superior glossopharyngeal ganglion Strong 3C
TS24: superior vagus ganglion Strong 3C

Specimen 3D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: sympathetic ganglion Strong 3D
TS24: brainstem Present Regionally restricted 3D Expression was detected in the facial nucleus and the sensory trigeminal nuclei.

Specimen 3E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: sympathetic ganglion Strong Regionally restricted 3E Expression was strong in the celiac ganglion.

Specimen 3F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: enteric nervous system Strong Regionally restricted 3F Expression was strong in enteric neurons in the digestive tract.

Specimen not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: ciliary ganglion Strong
TS24: facial ganglion Strong
TS24: otic ganglion Strong
TS24: sphenopalatine ganglion Strong
TS24: submandibular ganglion Strong
TS24: amygdala Present Regionally restricted Expression was detected in the anterior cortical and medial amygdaloid nuclei.

Specimen 3G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brainstem Present Regionally restricted 3G Expression was detected in the motor trigeminal nucleus and the oculomotor nucleus.
TS24: superior colliculus Weak 3G

Specimen 3H: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brainstem Present Regionally restricted 3H Expression was detected in the nucleus ambiguus, the dorsal nucleus of the vagus, and the hypoglossal nucleus.

Specimen 3I: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: thalamus Present Regionally restricted 3I Expression was detected in the ventral posterolateral and posteromedial thalamic nuclei.

Specimen 4A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: olfactory epithelium Present 4A
TS24: main olfactory bulb Absent 4A
TS24: vomeronasal organ epithelium Absent 4A

Specimen 4B: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: olfactory cortex Present Non-Uniform 4B Expression was strong in the anterior olfactory nucleus and also detected in the bed nucleus of the accessory olfactory tract.
TS24: main olfactory bulb Absent 4B

Specimen 4E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cochlear ganglion Strong 4E
TS24: vestibular ganglion Strong 4E
TS24: organ of Corti Present 4E
TS24: saccule Present Regionally restricted 4E Expression was detected in the maculae.
TS24: utricle Present Regionally restricted 4E Expression was detected in the maculae.

Specimen 4F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brainstem Present Regionally restricted 4F Expression was detected in the facial nucleus, the sensory trigeminal nuclei, and the medial, superior and spinal vestibular nuclei. Moderate expression was noted in the cochlear nucleus.
TS24: labyrinth epithelium Present 4F
TS24: vestibular component epithelium Absent 4F Expression was not detected in the ampullary crests.
TS24: inferior colliculus Moderate 4F

Specimen 5A: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical plate Strong Regionally restricted 5A Strong expression was detected in the superficial part of the cortical plate. Expression was weaker in the deeper part of the cortical plate.
TS23: cerebral cortex intermediate zone Weak 5A
TS23: cerebral cortex subventricular zone Weak 5A
TS23: cerebral cortex ventricular layer Absent 5A

Specimen 5B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex layer Strong Regionally restricted 5B Strong expression was detected in the superficial part of the cortical plate. Expression was weaker in the deeper part of the cortical plate.
TS27: cerebral cortex intermediate zone Weak 5B
TS27: cerebral cortex subventricular zone Weak 5B
TS27: cerebral cortex ventricular zone Absent 5B

Specimen 5C: postnatal day 16 (more )
Structure Level Pattern Image Note
TS28: cortical layer IV Moderate 5C

Specimen 5D: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: hippocampus Present Regionally restricted 5D Expression was strong in the stratum pyramidalis of the cornu ammonis (CA) 1 field but weak in the CA3 field and the dentate gyrus.

Specimen 5E: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: dentate gyrus Present 5E
TS27: hippocampus CA1 Present 5E
TS27: hippocampus CA3 Present 5E

Specimen 5F: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 5F
TS28: hippocampus region Weak 5F Expression was slightly down-regulated in the CA regions.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory