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Gm38509 Gene Detail
Summary
  • Symbol
    Gm38509
  • Name
    predicted gene, 38509
Location &
Maps
more
  • Sequence Map
    Chr3:34826224-34836495 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    452 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621394
 lncRNA gene Chr3:34826224-34836495 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006155
 lincRNA gene Chr3:32464263-32477218 (+)
A/J MGP_AJ_G0006147
 lincRNA gene Chr3:31923246-31933068 (+)
AKR/J MGP_AKRJ_G0006123
 lincRNA gene Chr3:32493133-32505266 (+)
BALB/cJ MGP_BALBcJ_G0006124
 lincRNA gene Chr3:31584919-31595120 (+)
C3H/HeJ MGP_C3HHeJ_G0006073
 lincRNA gene Chr3:32528512-32540513 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006285
 lincRNA gene Chr3:34065994-34076017 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005598
 lincRNA gene Chr3:29692839-29704215 (+)
CAST/EiJ MGP_CASTEiJ_G0006008
 lincRNA gene Chr3:32374405-32385887 (+)
CBA/J MGP_CBAJ_G0006058
 lincRNA gene Chr3:34961551-34974774 (+)
DBA/2J MGP_DBA2J_G0006078
 lincRNA gene Chr3:31405938-31416379 (+)
FVB/NJ MGP_FVBNJ_G0006101
 lincRNA gene Chr3:30857891-30869804 (+)
LP/J MGP_LPJ_G0006159
 lincRNA gene Chr3:33254798-33265681 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006091
 lincRNA gene Chr3:37450872-37470045 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006289
 lincRNA gene Chr3:32278578-32288377 (+)
PWK/PhJ MGP_PWKPhJ_G0005953
 lincRNA gene Chr3:30995755-31011666 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005862
 lincRNA gene Chr3:31688056-31697852 (+)
WSB/EiJ MGP_WSBEiJ_G0006055
 lincRNA gene Chr3:32309859-32321142 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102638436 NCBI Gene Model | MGI Sequence Detail 10272 C57BL/6J ±  kb
transcript NR_110488 RefSeq | MGI Sequence Detail 1172 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory