About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:45335 Landry C, et al., HNF-6 is expressed in endoderm derivatives and nervous system of the mouse embryo and participates to the cross-regulatory network of liver-enriched transcription factors. Dev Biol. 1997 Dec 15;192(2):247-57
Assay type: RNA in situ
MGI Accession ID: MGI:5806154
Gene symbol: Onecut1
Gene name: one cut domain, family member 1
Probe: HNF-6 cDNA3
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1A/B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: biliary bud Present 1A/B
TS15: hepatic primordium Present 1A/B
TS15: foregut epithelium Absent 1A/B No expression in the simple columnar epithelium.
Specimen 1C/D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: hepatic primordium Present Regionally restricted 1C/D Expressed in the liver primordium within the septum transversum.
Specimen 1E/F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: liver Absent 1E/F
Specimen 1G/H: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: liver Present 1G/H
Specimen 2A/B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: gallbladder Present 2A/B
Specimen 2C/D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: pancreas Strong 2C/D
Specimen 2E/F: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: pancreas Strong 2E/F
Specimen 2G/H: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: pancreatic acinus Strong 2G/H
TS26: islets of Langerhans Absent 2G/H
Specimen 3A/B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midbrain Present Regionally restricted 3A/B Expressed in the dorsal and ventral parts.
TS17: midbrain mantle layer Present 3A/B
TS17: midbrain floor plate Absent 3A/B
TS17: midbrain ventricular layer Absent 3A/B
TS17: notochord Absent 3A/B
Specimen 3C/D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindbrain Present Regionally restricted 3C/D Expressed in the ventral part.
TS17: diencephalon Present 3C/D
TS17: hindbrain mantle layer Present 3C/D
TS17: diencephalon floor plate Absent 3C/D
TS17: hindbrain floor plate Absent 3C/D
TS17: hindbrain ventricular layer Absent 3C/D
TS17: notochord Absent 3C/D
Specimen 3E/F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present Regionally restricted 3E/F Expressed in the olfactory lobe.
TS17: nasal pit Absent 3E/F
TS17: telencephalon mantle layer Present 3E/F
TS17: telencephalon ventricular layer Absent 3E/F
Specimen 3G/H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Strong Regionally restricted 3G/H Expressed within the neuroepithelium facing the optic pit. Abundantly expressed in a very limited zone where the two primary lateral evaginations, i.e., the optic stalks, arise, but was absent from the optic stalks.
TS17: diencephalon mantle layer Present 3G/H
TS17: diencephalon ventricular layer Absent 3G/H
Specimen 3I/J: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: retina Present 3I/J
Specimen 3K/L: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: midbrain Present Regionally restricted 3K/L Expressed in the nuclei.
TS25: pons Present Regionally restricted 3K/L Expressed in the nuclei.
TS25: trigeminal ganglion Strong 3K/L
Specimen 4C/D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 4C/D Expressed in the dorsal and ventral mantle layer.
TS17: dorsal root ganglion Present 4C/D
Specimen 4E/F: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: spinal cord lateral wall Present Regionally restricted 4E/F Expressed in the ventral horn.
TS23: dorsal root ganglion Present 4E/F
Specimen not shown: embryonic day 7.0 (more )
Structure Level Pattern Image Note
TS10: embryo Absent
TS10: extraembryonic component Absent
Specimen not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Absent
TS13: extraembryonic component Absent
Specimen not shown: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: facial ganglion Present
TS25: liver Present
TS25: medulla oblongata Present Regionally restricted Expressed in the nuclei.
TS25: retina layer Present Regionally restricted Expressed in the retina ganglion cells.
Specimen not shown: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: liver Present
Specimen not shown: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: foregut-midgut junction Strong
TS14: primitive hindgut Strong
TS14: central nervous system Strong Regionally restricted Expressed in the trigeminal and facial-acoustic ganglia.
Specimen not shown: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: foregut-midgut junction Strong
TS18: hindgut Strong
Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: foregut Absent
TS20: hindgut Absent
TS20: midgut Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/17/2024
MGI 6.24 		The Jackson Laboratory