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Gene Expression Data
Assay Details
Assay
Reference: J:80131 Ren SY, et al., Targeted insertion results in a rhombomere 2-specific Hoxa2 knockdown and ectopic activation of Hoxa1 expression. Dev Dyn. 2002 Nov;225(3):305-15
Assay type: RNA in situ
MGI Accession ID: MGI:5905631
Gene symbol: Hoxa1
Gene name: homeobox A1
Probe: Hoxa1 probe7
Probe preparation: Antisense RNA
Results
Specimen 6A: embryonic day 10.5 (more )
Note: Flat mount
Structure Level Pattern Image Note
TS17: hindbrain Absent 6A
Specimen 6B: embryonic day 10.5; Hoxa2tm1Fmr/Hoxa2tm1Fmr (more )
Note: Flat mount
Structure Level Pattern Image Note
TS17: rhombomere 1 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 2 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 3 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 4 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 5 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 6 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 7 Present Regionally restricted 6B Expression is dorsoventral.
TS17: rhombomere 8 Present Regionally restricted 6B Expression is dorsoventral.
Specimen 6C: embryonic day 10.5; Hoxa2tm1.2Fmr/Hoxa2tm1.2Fmr (more )
Note: Flat mount
Structure Level Pattern Image Note
TS17: rhombomere 2 Absent 6C
Specimen 6F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial arch Absent 6F
TS17: hindbrain Absent 6F
Specimen 6G: embryonic day 10.5; Hoxa2tm1Fmr/Hoxa2tm1Fmr (more )
Structure Level Pattern Image Note
TS17: 2nd branchial arch Strong 6G
TS17: 1st branchial arch Present 6G
TS17: trigeminal ganglion Present 6G
Specimen not shown: embryonic day 10.5; Hoxa2tm1Fmr/Hoxa2+ (more )
Structure Level Pattern Image Note
TS17: branchial arch Present
TS17: hindbrain Present
TS17: trigeminal ganglion Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/17/2024
MGI 6.24 		The Jackson Laboratory