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Gene Expression Data
Assay Details
Assay
Reference: J:198109 Oeschger FM, et al., Gene expression analysis of the embryonic subplate. Cereb Cortex. 2012 Jun;22(6):1343-59
Assay type: RNA in situ
MGI Accession ID: MGI:6258684
Gene symbol: Csmd3
Gene name: CUB and Sushi multiple domains 3
Probe: Csmd3 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2k: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 2k
TS23: cortical plate Weak 2k

Specimen 3e wild-type: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 3e Wild-type

Specimen 3e Reeler: embryonic day 15.5; Relnrl-Orl/Relnrl-Orl (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Present Regionally restricted 3e Reeler Expression was shifted to the superplate in a broad band just below the cortical pial surface of the reeler mutant.

Specimen 4e E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cerebral cortex Present Regionally restricted 4e E13.5 Expression was detected in the lateral cortex.

Specimen 4e E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cortical subplate Present 4e E14.5
TS22: cortical plate Present Regionally restricted 4e E14.5 Expression was detected in the lateral cortical plate.

Specimen 4e E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 4e E15.5
TS23: cortical plate Present Regionally restricted 4e E15.5 Expression was detected in the lateral cortical plate.

Specimen 4e E17.5: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex Weak Ubiquitous 4e E17.5

Specimen 4e P8: postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Weak Ubiquitous 4e P8

Specimen 4e Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Weak Ubiquitous 4e Adult

Specimen S4g: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: amygdala Present S4g
TS23: cortical subplate Present S4g
TS23: globus pallidus Present S4g
TS23: piriform cortex Present S4g

Specimen S4g': postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: corpus striatum Present S4g'
TS28: hippocampus Present S4g'
TS28: neocortex Present S4g'
TS28: thalamus Present S4g'

Specimen not shown: embryonic day 13.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS22: piriform cortex Present
TS22: prethalamus Present

Specimen not shown: embryonic day 14.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS22: amygdala Present
TS22: globus pallidus Present
TS22: hypothalamus Present
TS22: piriform cortex Present
TS22: prethalamus Present
TS22: telencephalon septum Present

Specimen not shown: embryonic day 15.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS23: amygdala Present
TS23: globus pallidus Present
TS23: hypothalamus Present
TS23: piriform cortex Present
TS23: prethalamus Present

Specimen not shown: embryonic day 17.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS25: telencephalon Present Widespread
TS25: amygdala Present
TS25: basal ganglia Present
TS25: hypothalamus Present
TS25: prethalamus Present
TS25: telencephalon septum Present
TS25: thalamus Present

Specimen not shown: postnatal day 8 (more )
Note: Table S5
Structure Level Pattern Image Note
TS28: diencephalon Present Ubiquitous
TS28: telencephalon Present Ubiquitous

Specimen not shown: postnatal adult (more )
Note: Table S5
Structure Level Pattern Image Note
TS28: diencephalon Weak Ubiquitous
TS28: telencephalon Weak Ubiquitous


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory