Gene Expression Data
Assay Details
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Assay
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Reference:
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J:72911
Murdoch JN, et al., Severe neural tube defects in the loop-tail mouse result from mutation of Lpp1, a novel gene involved in floor plate specification. Hum Mol Genet. 2001 Oct 15;10(22):2593-601
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6451127
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Gene symbol:
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Vangl2
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Gene name:
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VANGL planar cell polarity 2
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Probe:
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Lpp1 cDNA1
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Probe preparation:
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Antisense RNA
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Results
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Specimen
3B:
embryonic day 8.5; Vangl2Lp/Vangl2 +
(more  )
Note: 7-8 somite stage embryo.
Specimen
3B:
(close  )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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7-8 somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Present |
Regionally restricted |
3B
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future midbrain |
Present |
Regionally restricted |
3B
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future spinal cord |
Present |
Regionally restricted |
3B
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Expression extends to the site of neural tube closure and declines in a rostro-caudal direction.
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| TS13: future prosencephalon |
Present |
Regionally restricted |
3B
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Expression extends to the occipital region.
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Specimen
3C:
embryonic day 8.5; Vangl2Lp/Vangl2 +
(more )
Note: 7-8 somite stage embryo.
Specimen
3C:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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7-8 somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Present |
Regionally restricted |
3C
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future midbrain |
Present |
Regionally restricted |
3C
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future spinal cord |
Present |
Regionally restricted |
3C
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Expression extends to the site of neural tube closure and declines in a rostro-caudal direction.
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| TS13: future prosencephalon |
Present |
Regionally restricted |
3C
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Expression extends to the occipital region.
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Specimen
3D:
embryonic day 8.5; Vangl2Lp/ Vangl2Lp
(more )
Note: 7-8 somite stage embryo.
Specimen
3D:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2Lp
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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7-8 somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Present |
Regionally restricted |
3D
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future midbrain |
Present |
Regionally restricted |
3D
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future spinal cord |
Present |
Regionally restricted |
3D
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Expression extends to the site of neural tube closure and declines in a rostro-caudal direction.
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| TS13: future prosencephalon |
Present |
Regionally restricted |
3D
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Expression extends to the occipital region.
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Specimen
3E:
embryonic day 8.5; Vangl2Lp/ Vangl2Lp
(more )
Note: 7-8 somite stage embryo.
Specimen
3E:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2Lp
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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|
Note:
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7-8 somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Present |
Regionally restricted |
3E
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
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| TS13: future midbrain |
Present |
Regionally restricted |
3E
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Expression is as a midline stripe extending from the midbrain to the upper spinal region.
|
| TS13: future spinal cord |
Present |
Regionally restricted |
3E
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Expression extends to the site of neural tube closure and declines in a rostro-caudal direction.
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| TS13: future prosencephalon |
Present |
Regionally restricted |
3E
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Expression extends to the occipital region.
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Specimen
3F:
embryonic day 9.5
(more )
Specimen
3F:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Present |
Regionally restricted |
3F
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Expression is as a midline stripe extending from the midbrain into most of the spine with the intensity declining in a rostro-caudal direction.
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| TS15: future midbrain |
Present |
Regionally restricted |
3F
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Expression is as a midline stripe extending from the midbrain into most of the spine with the intensity declining in a rostro-caudal direction.
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| TS15: future spinal cord |
Present |
Regionally restricted |
3F
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Expression is as a midline stripe extending from the midbrain into most of the spine with the intensity declining in a rostro-caudal direction.
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| TS15: future forebrain |
Present |
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3F
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Specimen
3G:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2Lp
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Present |
Regionally restricted |
3G
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Expression is as a midline stripe extending from the midbrain into most of the spine with the intensity declining in a rostro-caudal direction.
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| TS15: future midbrain |
Present |
Regionally restricted |
3G
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Expression is as a midline stripe extending from the midbrain into most of the spine with the intensity declining in a rostro-caudal direction.
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| TS15: future spinal cord |
Present |
Regionally restricted |
3G
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Expression is as a midline stripe extending from the midbrain into most of the spine with the intensity declining in a rostro-caudal direction.
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| TS15: future forebrain |
Present |
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3G
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Specimen
3H:
embryonic day 8.5; Vangl2Lp/Vangl2 +
(more )
Note: 7-8 somite stage embryo.
Specimen
3H:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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7-8 somite stage embryo.
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Specimen
3I:
embryonic day 8.5; Vangl2Lp/ Vangl2Lp
(more )
Note: 7-8 somite stage embryo.
Specimen
3I:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2Lp
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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7-8 somite stage embryo.
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Specimen
3J:
embryonic day 9.5
(more )
Specimen
3J:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
3K:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2Lp
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
3L:
embryonic day 9.5
(more )
Specimen
3L:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future spinal cord |
Present |
Regionally restricted |
3L
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Expression is as a midline stripe extending into most of the spine with the intensity declining in a rostro-caudal direction.
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Specimen
3M:
(close )
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Genetic Background:
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LPT/LeJ
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Mutant Allele(s):
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Vangl2Lp/Vangl2Lp
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future spinal cord |
Present |
Regionally restricted |
3M
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Expression is as a midline stripe extending into most of the spine with the intensity declining in a rostro-caudal direction.
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Specimen
3N:
embryonic day 16.5
(more )
Specimen
3N:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 16.5
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Sex:
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Female
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
3O:
embryonic day 15.5
(more )
Specimen
3O:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: eyelid epithelium |
Present |
Regionally restricted |
3O
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Expression is in the outer eyelid epithelium and at the site of eyelid fusion.
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Specimen
3P:
embryonic day 12.5
(more )
Specimen
3P:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: outflow tract |
Strong |
Regionally restricted |
3P
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Expression is in the right ventricular outflow tract.
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Specimen
3Q:
embryonic day 14.5
(more )
Specimen
3Q:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
4A:
embryonic day 9.5
(more )
Specimen
4A:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
4C:
embryonic day 10.5
(more )
Specimen
4C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
4E:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ
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Mutant Allele(s):
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Shhtm1Chg/Shhtm1Chg
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
4F:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ
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Mutant Allele(s):
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Shhtm1Chg/Shhtm1Chg
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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