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Gene Expression Data
Assay Details
Assay
Reference: J:316176 Volker LA, et al., Comparative analysis of Neph gene expression in mouse and chicken development. Histochem Cell Biol. 2012 Mar;137(3):355-66
Assay type: RNA in situ
MGI Accession ID: MGI:7278812
Gene symbol: Kirrel1
Gene name: kirre like nephrin family adhesion molecule 1
Probe: Neph1 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch Present 1A
TS15: dorsal aorta Present 1A
TS15: olfactory placode Present 1A
TS15: sclerotome Present 1A
TS15: future brain Present 1A
TS15: otocyst Present Regionally restricted 1A Expressed around the otic vesicle.
TS15: forelimb bud Present Uniform 1A
TS15: hindlimb ridge Present Uniform 1A
TS15: heart atrium Weak 1A
TS15: primitive ventricle Weak 1A

Specimen 1B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: otocyst Absent 1B
TS17: telencephalon Strong Regionally restricted 1B Expressed in the telocele.
TS17: branchial arch Present 1B
TS17: olfactory placode Present 1B
TS17: sclerotome Present 1B
TS17: forelimb bud Present Uniform 1B
TS17: hindlimb bud Present Uniform 1B
TS17: heart atrium Present 1B Increased expression.
TS17: primitive ventricle Present 1B Increased expression.

Specimen 1C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: otocyst Absent 1C
TS19: telencephalon Strong Regionally restricted 1C Expressed in the telocele.
TS19: forelimb bud Present 1C
TS19: hindlimb bud Present 1C
TS19: olfactory epithelium Present 1C
TS19: sclerotome Present 1C
TS19: footplate apical ectodermal ridge Present 1C Increased level.
TS19: handplate apical ectodermal ridge Present 1C Increased level.
TS19: heart atrium Present 1C Increased expression.
TS19: heart left ventricle Present 1C Increased expression.
TS19: hindbrain Trace 1C Almost void of expression.
TS19: midbrain Trace 1C Almost void of expression.

Specimen 2A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: branchial arch Present 2A Almost ubiquitous expression with locally increased intensity.
TS19: olfactory epithelium Present 2A Almost ubiquitous expression with locally increased intensity.

Specimen 2B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: inferior colliculus Present 2B
TS22: superior colliculus Present 2B
TS22: spinal cord Weak Regionally restricted 2B Expressed in two tracts of cells spanned the spinal cord in a cranio-caudal direction.
TS22: midbrain tegmentum Present Regionally restricted 2B Expressed in small domains.
TS22: thalamus Present Regionally restricted 2B Expressed in small domains.

Specimen 2C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: adenohypophysis Present 2C anterior pituitary lobe
TS20: neurohypophysis pars nervosa Present Regionally restricted 2C Expressed in the base of the third ventricle in the neuroepithelium of the developing posterior lobe.

Specimen 2D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: bronchus epithelium Present 2D

Specimen 2E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neocortex Present 2E

Specimen 2F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Present 2F

Specimen 2G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: ganglionic eminence Present 2G


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory