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Gene Expression Data
Assay Details
Assay
Reference: J:309443 Hilger AC, et al., Targeted Resequencing of 29 Candidate Genes and Mouse Expression Studies Implicate ZIC3 and FOXF1 in Human VATER/VACTERL Association. Hum Mutat. 2015 Dec;36(12):1150-4
Assay type: RNA in situ
MGI Accession ID: MGI:7327341
Gene symbol: Zic3
Gene name: zinc finger protein of the cerebellum 3
Probe: Zic3 probe6
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1 E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: eye Present Regionally restricted 1_Zic3 E9.5
TS15: future brain Present Regionally restricted 1_Zic3 E9.5
TS15: future spinal cord Present Regionally restricted 1_Zic3 E9.5
TS15: limb Present Regionally restricted 1_Zic3 E9.5
TS15: unsegmented mesenchyme Present Regionally restricted 1_Zic3 E9.5 Expression is in a stripe at the anterior pre-somitic mesoderm.
TS15: heart Absent 1_Zic3 E9.5
Specimen 1 E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: brain Present Regionally restricted 1_Zic3 E10.5
TS17: eye Present Regionally restricted 1_Zic3 E10.5
TS17: future spinal cord Present Regionally restricted 1_Zic3 E10.5
TS17: limb Present Regionally restricted 1_Zic3 E10.5
TS17: unsegmented mesenchyme Present Regionally restricted 1_Zic3 E10.5 Expression is in a stripe at the anterior pre-somitic mesoderm.
TS17: cloaca Absent 1_Zic3 E10.5
TS17: heart Absent 1_Zic3 E10.5
Specimen 1 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: brain Present Regionally restricted 1_Zic3 E11.5
TS19: eye Present Regionally restricted 1_Zic3 E11.5
TS19: future spinal cord Present Regionally restricted 1_Zic3 E11.5
TS19: limb Present Regionally restricted 1_Zic3 E11.5
TS19: unsegmented mesenchyme Present Regionally restricted 1_Zic3 E11.5 Expression is in a stripe at the anterior pre-somitic mesoderm.
TS19: cloaca Absent 1_Zic3 E11.5
TS19: genital tubercle Absent 1_Zic3 E11.5
TS19: heart Absent 1_Zic3 E11.5
Specimen 1 E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: brain Present Regionally restricted 1_Zic3 E12.5
TS20: eye Present Regionally restricted 1_Zic3 E12.5
TS20: limb Present Regionally restricted 1_Zic3 E12.5
TS20: spinal cord Present Regionally restricted 1_Zic3 E12.5
TS20: unsegmented mesenchyme Present Regionally restricted 1_Zic3 E12.5 Expression is in a stripe at the anterior pre-somitic mesoderm.
TS20: heart Absent 1_Zic3 E12.5
Specimen 1 E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: brain Present Regionally restricted 1_Zic3 E13.5
TS21: eye Present Regionally restricted 1_Zic3 E13.5
TS21: limb Present Regionally restricted 1_Zic3 E13.5
TS21: spinal cord Present Regionally restricted 1_Zic3 E13.5
TS21: unsegmented mesenchyme Present Regionally restricted 1_Zic3 E13.5 Expression is in a stripe at the anterior pre-somitic mesoderm.
TS21: heart Absent 1_Zic3 E13.5
Specimen 1 E12.5 male: embryonic day 12.5 (more )
Note: There were no sex-specific differences in expression.
Structure Level Pattern Image Note
TS20: genital tubercle of male Weak Regionally restricted 1_Male E12.5 Expression is in in the lateral aspects and is absent in the anal region.
TS20: anal region Absent 1_Male E12.5
Specimen 1 E12.5 female: embryonic day 12.5 (more )
Note: There were no sex-specific differences in expression.
Structure Level Pattern Image Note
TS20: genital tubercle of female Weak Regionally restricted 1_Female E12.5 Expression is in in the lateral aspects and is absent in the anal region.
TS20: anal region Absent 1_Female E12.5
Specimen 1 E13.5 male: embryonic day 13.5 (more )
Note: There were no sex-specific differences in expression.
Structure Level Pattern Image Note
TS21: genital tubercle of male Weak Regionally restricted 1_Male E13.5 Expression is in in the lateral aspects and is absent in the anal region.
TS21: anal region Absent 1_Male E13.5
Specimen 1 E13.5 female: embryonic day 13.5 (more )
Note: There were no sex-specific differences in expression.
Structure Level Pattern Image Note
TS21: genital tubercle of female Weak Regionally restricted 1_Female E13.5 Expression is in in the lateral aspects and is absent in the anal region.
TS21: anal region Absent 1_Female E13.5
Specimen 1 E14.5 male: embryonic day 14.5 (more )
Note: There were no sex-specific differences in expression.
Structure Level Pattern Image Note
TS22: genital tubercle of male Weak Regionally restricted 1_Male E14.5 Expression is in in the lateral aspects and is absent in the anal region.
TS22: anal region Absent 1_Male E14.5
Specimen 1 E14.5 female: embryonic day 14.5 (more )
Note: There were no sex-specific differences in expression.
Structure Level Pattern Image Note
TS22: genital tubercle of female Weak Regionally restricted 1_Female E14.5 Expression is in in the lateral aspects and is absent in the anal region.
TS22: anal region Absent 1_Female E14.5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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06/12/2024
MGI 6.13 		The Jackson Laboratory