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Gene Expression Data
Assay Details
Assay
Reference: J:52351 Eckhardt F, et al., Cloning and expression pattern of a murine semaphorin homologous to H-sema IV. Neuroreport. 1998 Dec 1;9(17):3975-9
Assay type: RNA in situ
MGI Accession ID: MGI:7645155
Gene symbol: Sema3f
Gene name: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
Results
Specimen E11.5 not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: future spinal cord Present Regionally restricted Expression in ventral and dorsolateral parts of spinal cord.
TS19: dorsal root ganglion Weak
TS19: integumental system Present Regionally restricted Expresssion in skin at all stages examined.

Specimen 3A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: spinal cord thoracic region Present Regionally restricted 3A Strongest expression in dorsal part of thoracic spinal cord.
TS22: dorsal root ganglion Present 3A
TS22: trunk mesenchyme Present Regionally restricted 3A Expression in cells surrounding notochord.
TS22: vertebral cartilage condensation Absent 3A No expression in cartilage primordia of vertebra.

Specimen 3B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: corpora quadrigemina Present 3B Expression in lamina quadrigemina of mesencephalon.
TS22: cerebellum Present 3B Expression in cerebellar primordium.
TS22: 4th ventricle choroid plexus Present 3B

Specimen 3C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: neural retina Present 3C Expression in some cells localized in the neural retina.

Specimen 3D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cortical plate Present 3D

Specimen E14.5 not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hypothalamus Present Expression in parts of hypothalamus.
TS22: thalamus Weak Regionally restricted Weak expression at interthalamic adhesion (massa intermedia).
TS22: medulla oblongata Weak Regionally restricted Weak expression in lateral parts of medulla oblongata.
TS22: skin Present Expresssion in skin at all stages examined.
TS22: lung Present
TS22: submandibular gland primordium Present
TS22: mediastinum Weak Regionally restricted Weak expression in cells surrounding thoracic aorta and exophagus.

Specimen 3E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: skin Present 3E Expresssion in skin at all stages examined.

Specimen E16.5 not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord Strong Regionally restricted Strong expression in dorsal part of spinal cord.
TS24: dorsal root ganglion Strong
TS24: lung Present
TS24: submandibular gland Present
TS24: mediastinum Weak Regionally restricted Weak expression in cells surrounding thoracic aorta and exophagus.

Specimen 3F: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: metanephros Present 3F
TS25: intestine Present Regionally restricted 3F Expression in inner layers of intestine.

Specimen E17.5 not shown: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: skin Present Expresssion in skin at all stages examined.
TS25: lung Present
TS25: submandibular gland Present
TS25: mediastinum Weak Regionally restricted Weak expression in cells surrounding thoracic aorta and exophagus.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory