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Flt4 Gene Detail
Summary
  • Symbol
    Flt4
  • Name
    FMS-like tyrosine kinase 4
  • Synonyms
    Flt-4, VEGFR-3, VEGFR3
  • Feature Type
    protein coding gene
  • IDs
    MGI:95561
    NCBI Gene: 14257
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:49500506-49543566 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 29.69 cM, cytoband A5-B1
  • Mapping Data
    12 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1071 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_95561
 protein coding gene Chr11:49500090-49543566 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018234
 protein coding gene Chr11:48736562-48788357 (+)
A/J MGP_AJ_G0018202
 protein coding gene Chr11:46860584-46909608 (+)
AKR/J MGP_AKRJ_G0018172
 protein coding gene Chr11:48371154-48415923 (+)
BALB/cJ MGP_BALBcJ_G0018172
 protein coding gene Chr11:47166655-47195407 (+)
C3H/HeJ MGP_C3HHeJ_G0017985
 protein coding gene Chr11:48367409-48411206 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018623
 protein coding gene Chr11:50167137-50242774 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016275
 protein coding gene Chr11:44479385-44535973 (+)
CAST/EiJ MGP_CASTEiJ_G0017547
 protein coding gene Chr11:48318009-48375429 (+)
CBA/J MGP_CBAJ_G0017960
 protein coding gene Chr11:52519630-52580703 (+)
DBA/2J MGP_DBA2J_G0018067
 protein coding gene Chr11:46681010-46738891 (+)
FVB/NJ MGP_FVBNJ_G0018061
 protein coding gene Chr11:46312914-46342023 (+)
LP/J MGP_LPJ_G0018142
 protein coding gene Chr11:49059153-49115642 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018086
 protein coding gene Chr11:54076757-54123614 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018667
 protein coding gene Chr11:48471193-48514061 (+)
PWK/PhJ MGP_PWKPhJ_G0017325
 protein coding gene Chr11:47065360-47109674 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017120
 protein coding gene Chr11:48160769-48214916 (+)
WSB/EiJ MGP_WSBEiJ_G0017600
 protein coding gene Chr11:48107497-48159185 (+)



Homology
more
  • Human Ortholog
    FLT4, fms related receptor tyrosine kinase 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FLT4, fms related receptor tyrosine kinase 4
  • Synonyms
    CHTD7, FLT-4, FLT41, LMPH1A, LMPHM1, PCL, VEGFR-3, VEGFR3
  • Links
    NCBI Gene ID: 2324
    neXtProt AC: NX_P35916
    UniProt: P35916

  • Chr Location
    5q35.3; chr5:180601506-180650298 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with Flt4 mouse models; 1 with human FLT4 associations

Human Disease Mouse Models
      
IDs
 View 1 model
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    30 phenotypes from 6 alleles in 6 genetic backgrounds
    11 phenotypes from multigenic genotypes
    5 images
    110 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Embryos homozygous for a targeted null mutation show growth retardation, vascular abnormalities, severe anemia and die from cardiovascular failure at embryonic day 9.5. Heterozygotes for another mutation show abdominal chylous ascites, abnormal lymphaticvessels, and lymphedema.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    103
  • GO References
    22
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1044
  • Tissues
    154
  • cDNA Data
    21
  • Literature Summary
    182
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 14257 NCBI Gene Model | MGI Sequence Detail 43061 C57BL/6J ±  kb
    transcript NM_008029 RefSeq | MGI Sequence Detail 5853 ZRU/MplStud  
    polypeptide P35917 UniProt | EBI | MGI Sequence Detail 1363 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 35
      Genomic 1
      cDNA 24
      Primer pair 8
      Other 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGD-MRK-1984, MGD-MRK-9835, MGD-MRK-9839, MGI:2144119, MGI:88402
    References
    more
    • Summaries
      All 340
      Developmental Gene Expression 182
      Diseases 1
      Gene Ontology 22
      Phenotypes 110
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:354188 Vallecillo-Garcia P, et al., Mesenchymal Osr1+ cells regulate embryonic lymphatic vessel formation. Development. 2024 Sep 1;151(17):dev202747
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory