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Muc1 Gene Detail
Summary
  • Symbol
    Muc1
  • Name
    mucin 1, transmembrane
  • Synonyms
    CD227, EMA, Muc-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:97231
    NCBI Gene: 17829
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:89136364-89140688 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 39.02 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    174 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97231
 protein coding gene Chr3:89136363-89140688 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027424
 protein coding gene Chr3:89432448-89436772 (+)
A/J MGP_AJ_G0027388
 protein coding gene Chr3:86474228-86478525 (+)
AKR/J MGP_AKRJ_G0027352
 protein coding gene Chr3:88564701-88568998 (+)
BALB/cJ MGP_BALBcJ_G0027397
 protein coding gene Chr3:86437901-86442265 (+)
C3H/HeJ MGP_C3HHeJ_G0027139
 protein coding gene Chr3:88765586-88769883 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027843
 protein coding gene Chr3:92817081-92821405 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025195
 protein coding gene Chr3:81954067-81958299 (+)
CAST/EiJ MGP_CASTEiJ_G0026585
 protein coding gene Chr3:89117011-89121174 (+)
CBA/J MGP_CBAJ_G0027113
 protein coding gene Chr3:95995516-95999813 (+)
DBA/2J MGP_DBA2J_G0027251
 protein coding gene Chr3:85852607-85856971 (+)
FVB/NJ MGP_FVBNJ_G0027219
 protein coding gene Chr3:84193493-84197790 (+)
LP/J MGP_LPJ_G0027360
 protein coding gene Chr3:90511198-90515510 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027239
 protein coding gene Chr3:102217564-102221892 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027902
 protein coding gene Chr3:88316068-88320365 (+)
PWK/PhJ MGP_PWKPhJ_G0026319
 protein coding gene Chr3:85725225-85729511 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026138
 protein coding gene Chr3:87485469-87489732 (+)
WSB/EiJ MGP_WSBEiJ_G0026667
 protein coding gene Chr3:88708785-88713259 (+)



Homology
more
  • Human Ortholog
    MUC1, mucin 1, cell surface associated
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MUC1, mucin 1, cell surface associated
  • Synonyms
    ADMCKD, ADMCKD1, ADTKD2, Ca15-3, CA 15-3, CD227, EMA, H23AG, KL-6, MAM6, MCD, MCKD, MCKD1, MUC-1, MUC-1/SEC, MUC-1/X, MUC1/ZD, PEM, PEMT, PUM
  • Links
    NCBI Gene ID: 4582
    neXtProt AC: NX_P15941
    UniProt: P15941

  • Chr Location
    1q22; chr1:155185824-155192916 (-)  GRCh38
Human Diseases
more
  • Diseases
    7 with human MUC1 associations

Human Disease Mouse Models
      
IDs
IDs
IDs
IDs
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 2 alleles in 4 genetic backgrounds
    4 phenotypes from multigenic genotypes
    51 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele display delayed mammary tumor progression, impaired intestinal absorption of cholesterol, decreased gastric mucus accumulation, reduced secretion and accumulation of gallbladder mucin, and decreased susceptibility to cholesterol gallstone formation.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    19
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1013
  • Tissues
    83
  • cDNA Data
    48
  • Literature Summary
    112
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000042784 Ensembl Gene Model | MGI Sequence Detail 4325 C57BL/6J ±  kb
    transcript ENSMUST00000041142 Ensembl | MGI Sequence Detail 2242 Not Applicable  
    polypeptide ENSMUSP00000041963 Ensembl | MGI Sequence Detail 631 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 70
      Genomic 14
      cDNA 48
      Primer pair 8

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-12703, MGD-MRK-12704
    References
    more
    • Summaries
      All 220
      Developmental Gene Expression 112
      Diseases 1
      Gene Ontology 7
      Phenotypes 51
    • Earliest
      J:1889 Vos HL, et al., The mouse episialin (Muc1) gene and its promoter: rapid evolution of the repetitive domain in the protein. Biochem Biophys Res Commun. 1991 Nov 27;181(1):121-30
    • Latest
      J:352077 Kane E, et al., MicroRNA-7 regulates endocrine progenitor delamination and endocrine cell mass in developing pancreatic islets. iScience. 2024 Jul 19;27(7):110332
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory