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Gene Expression Data
Assay Details
Assay
Reference: J:53473 Niederreither K, et al., Retinoic acid synthesis and hindbrain patterning in the mouse embryo. Development. 2000 Jan;127(1):75-85
Assay type: RNA in situ
MGI Accession ID: MGI:1350669
Gene symbol: Crabp1
Gene name: cellular retinoic acid binding protein I
Probe: Crabp1 probe4
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 4C WT: embryonic day 8.25 (more )
Structure Level Pattern Image Note
TS13: rhombomere 2 Strong 4C
TS13: rhombomere 4 Strong 4C
TS13: rhombomere 3 Absent 4C
TS13: future hindbrain Present Regionally restricted 4C Strong expression in prospective rhombomere 6. Expression in prospective rhombomere 7.

Specimen 4D -/-: embryonic day 8.25; Aldh1a2tm1Ipc/Aldh1a2tm1Ipc (more )
Structure Level Pattern Image Note
TS13: rhombomere 2 Present Regionally restricted 4D The area of expression is larger than in wild-type embryos.
TS13: rhombomere 3 Absent 4D The area is not sharply defined and extends caudally within the myelencephalon.
TS13: future hindbrain Present Regionally restricted 4D Posteriorly (prospective rhombomere 7) expression is similar to wild-type embryos.

Specimen 5E WT: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Strong 5E
TS15: 3rd branchial arch mesenchyme derived from neural crest Strong 5E
TS15: head mesenchyme derived from neural crest Strong Regionally restricted 5E Expression in the cells accumulating in branchial arch 4. Expression in the frontonasal region in cells derived from the forebrain and midbrain.

Specimen 5F -/-: embryonic day 9.5; Aldh1a2tm1Ipc/Aldh1a2tm1Ipc (more )
Structure Level Pattern Image Note
TS15: head mesenchyme derived from neural crest Present Regionally restricted 5F Labelling in the frontonasal region of cells derived from the forebrain and midbrain is similar to that of wild-type embryos.
TS15: future hindbrain Present Regionally restricted 5F Labelling is in a few neural crest cells in the myelencephalon that appear to have taken abberant migratory routes.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory