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Krtap13-20 Gene Detail
Summary
  • Symbol
    Krtap13-20
  • Name
    keratin associated protein 13-20
  • Synonyms
    2310034C09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2152338
    NCBI Gene: 117172
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:88555735-88556677 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 51.40 cM, cytoband C3.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2152338
 protein coding gene Chr16:88555735-88556680 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022992
 protein coding gene Chr16:89579141-89581285 (+)
A/J MGP_AJ_G0022960
 protein coding gene Chr16:85420810-85421754 (+)
AKR/J MGP_AKRJ_G0022930
 protein coding gene Chr16:88025527-88026471 (+)
BALB/cJ MGP_BALBcJ_G0022962
 protein coding gene Chr16:85953415-85954360 (+)
C3H/HeJ MGP_C3HHeJ_G0022724
 protein coding gene Chr16:88586020-88586964 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023409
 protein coding gene Chr16:92456568-92457512 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020913
 protein coding gene Chr16:83251720-83252605 (+)
CAST/EiJ MGP_CASTEiJ_G0022245
 protein coding gene Chr16:89021731-89023956 (+)
CBA/J MGP_CBAJ_G0022693
 protein coding gene Chr16:96421132-96422076 (+)
DBA/2J MGP_DBA2J_G0022826
 protein coding gene Chr16:85354665-85355609 (+)
FVB/NJ MGP_FVBNJ_G0022801
 protein coding gene Chr16:84446660-84447641 (+)
LP/J MGP_LPJ_G0022896
 protein coding gene Chr16:89257121-89258799 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022821
 protein coding gene Chr16:100960095-100961039 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023427
 protein coding gene Chr16:88519383-88520327 (+)
PWK/PhJ MGP_PWKPhJ_G0021989
 protein coding gene Chr16:85508396-85511934 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021819
 protein coding gene Chr16:88077485-88078882 (+)
WSB/EiJ MGP_WSBEiJ_G0022294
 protein coding gene Chr16:88752472-88753416 (+)



Homology
more
  • Human Ortholog
    KRTAP13-2, keratin associated protein 13-2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP13-2, keratin associated protein 13-2
  • Synonyms
    KAP13-2
  • Links
    NCBI Gene ID: 337959
    neXtProt AC: NX_Q52LG2
    UniProt: Q52LG2

  • Chr Location
    21q22.11; chr21:30371390-30372271 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    835
  • Tissues
    17
  • cDNA Data
    4
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 117172 NCBI Gene Model | MGI Sequence Detail 943 C57BL/6J ±  kb
transcript NM_054100 RefSeq | MGI Sequence Detail 943 C57BL/6  
polypeptide NP_473441 RefSeq | MGI Sequence Detail 214 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007951 Keratin-associated protein, PMG type
Molecular
Reagents
less
  • All nucleic 5
    cDNA 4
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:7593838
References
more
  • Summaries
    All 24
    Developmental Gene Expression 3
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory