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D930020B18Rik Gene Detail
Summary
  • Symbol
    D930020B18Rik
  • Name
    RIKEN cDNA D930020B18 gene
  • Synonyms
    1500017I17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442001
    NCBI Gene: 216393
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr10:121477493-121529820 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 69.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1882 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442001
 protein coding gene Chr10:121477006-121530239 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017785
 protein coding gene Chr10:124929443-124988572 (+)
A/J MGP_AJ_G0017760
 protein coding gene Chr10:119937894-119991997 (+)
AKR/J MGP_AKRJ_G0017723
 protein coding gene Chr10:123517603-123579781 (+)
BALB/cJ MGP_BALBcJ_G0017724
 protein coding gene Chr10:120361591-120421258 (+)
C3H/HeJ MGP_C3HHeJ_G0017548
 protein coding gene Chr10:123731974-123787253 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018179
 protein coding gene Chr10:129176344-129239477 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015859
 protein coding gene Chr10:114265295-114318843 (+)
CAST/EiJ MGP_CASTEiJ_G0017108
 protein coding gene Chr10:124117429-124175791 (+)
CBA/J MGP_CBAJ_G0017517
 protein coding gene Chr10:134445933-134501288 (+)
DBA/2J MGP_DBA2J_G0017623
 protein coding gene Chr10:119068570-119125412 (+)
FVB/NJ MGP_FVBNJ_G0017618
 protein coding gene Chr10:118064773-118121920 (+)
LP/J MGP_LPJ_G0017697
 protein coding gene Chr10:125460086-125517394 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017646
 protein coding gene Chr10:136964499-137027299 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018219
 protein coding gene Chr10:123576665-123632068 (+)
PWK/PhJ MGP_PWKPhJ_G0016893
 protein coding gene Chr10:119192380-119251532 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016684
 protein coding gene Chr10:122441930-122499018 (+)
WSB/EiJ MGP_WSBEiJ_G0017169
 protein coding gene Chr10:123768575-123823038 (+)



Homology
more
  • Human Ortholog
    C12orf56, chromosome 12 open reading frame 56
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C12orf56, chromosome 12 open reading frame 56
  • Links
    NCBI Gene ID: 115749
    neXtProt AC: NX_Q8IXR9
    UniProt: Q8IXR9

  • Chr Location
    12q14.2; chr12:64264762-64390758 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 2 alleles in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Female mice homozygous for a null allele exhibit normal fertility.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    3
  • cDNA Data
    4
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047642 Ensembl Gene Model | MGI Sequence Detail 52328 C57BL/6J ±  kb
    transcript ENSMUST00000120642 Ensembl | MGI Sequence Detail 3335 Not Applicable  
    polypeptide ENSMUSP00000113963 Ensembl | MGI Sequence Detail 626 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 6
      cDNA 6

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:1916226
    References
    more
    • Summaries
      All 29
      Developmental Gene Expression 2
      Phenotypes 10
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:348425 Pham AH, et al., Thirteen Ovary-Enriched Genes Are Individually Not Essential for Female Fertility in Mice. Cells. 2024;13(10):802
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/22/2024
    MGI 6.24     		The Jackson Laboratory