About   Help   FAQ
5930403N24Rik Gene Detail
Summary
  • Symbol
    5930403N24Rik
  • Name
    RIKEN cDNA 5930403N24 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444171
    NCBI Gene: 100040846
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:37015398-37027311 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 19.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    319 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444171
 lncRNA gene Chr10:37015398-37027981 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015133
 unclassified non-coding RNA gene Chr10:35571144-35583049 (+)
A/J MGP_AJ_G0015107
 unclassified non-coding RNA gene Chr10:34638982-34650902 (+)
AKR/J MGP_AKRJ_G0015070
 unclassified non-coding RNA gene Chr10:35084444-35100296 (+)
BALB/cJ MGP_BALBcJ_G0015070
 unclassified non-coding RNA gene Chr10:34596991-34608880 (+)
C3H/HeJ MGP_C3HHeJ_G0014893
 unclassified non-coding RNA gene Chr10:35407110-35419873 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015526
 unclassified non-coding RNA gene Chr10:36643402-36656123 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013272
 unclassified non-coding RNA gene Chr10:32724077-32736612 (+)
CAST/EiJ MGP_CASTEiJ_G0014447
 unclassified non-coding RNA gene Chr10:35580124-35593667 (+)
CBA/J MGP_CBAJ_G0014872
 unclassified non-coding RNA gene Chr10:38367132-38380793 (+)
DBA/2J MGP_DBA2J_G0014965
 unclassified non-coding RNA gene Chr10:34202795-34214685 (+)
FVB/NJ MGP_FVBNJ_G0014976
 unclassified non-coding RNA gene Chr10:33690101-33705229 (+)
LP/J MGP_LPJ_G0015047
 unclassified non-coding RNA gene Chr10:35544092-35556552 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015003
 unclassified non-coding RNA gene Chr10:39122948-39134867 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015565
 unclassified non-coding RNA gene Chr10:35047801-35061746 (+)
PWK/PhJ MGP_PWKPhJ_G0014239
 unclassified non-coding RNA gene Chr10:33991342-34003504 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014027
 unclassified non-coding RNA gene Chr10:34888584-34900919 (+)
WSB/EiJ MGP_WSBEiJ_G0014550
 unclassified non-coding RNA gene Chr10:35346914-35360381 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 5930403N24Rik
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    4
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046463 Ensembl Gene Model | MGI Sequence Detail 11914 C57BL/6J ±  kb
transcript ENSMUST00000188813 Ensembl | MGI Sequence Detail 3965 Not Applicable  
polypeptide Q8BMI2 UniProt | EBI | MGI Sequence Detail 124 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory