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BC043934 Gene Detail
Summary
  • Symbol
    BC043934
  • Name
    cDNA sequence BC043934
  • Synonyms
    MGC:31404, MGC:49691
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2679715
    NCBI Gene: 270185
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:96317704-96320274 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 50.62 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    190 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679715
 lncRNA gene Chr9:96317704-96320274 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007485
 lincRNA gene Chr9:97628879-97631241 (-)
A/J MGP_AJ_G0007480
 lincRNA gene Chr9:94220070-94222424 (-)
AKR/J MGP_AKRJ_G0007452
 lincRNA gene Chr9:96529179-96531535 (-)
BALB/cJ MGP_BALBcJ_G0007457
 lincRNA gene Chr9:93906743-93909097 (-)
C3H/HeJ MGP_C3HHeJ_G0007402
 lincRNA gene Chr9:96929282-96931636 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007629
 lincRNA gene Chr9:100422406-100424761 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006811
 lincRNA gene Chr9:92039266-92041662 (-)
CAST/EiJ MGP_CASTEiJ_G0007305
 lincRNA gene Chr9:96702356-96704716 (-)
CBA/J MGP_CBAJ_G0007383
 lincRNA gene Chr9:103915561-103917915 (-)
DBA/2J MGP_DBA2J_G0007409
 lincRNA gene Chr9:93741891-93744245 (-)
FVB/NJ MGP_FVBNJ_G0007425
 lincRNA gene Chr9:92593571-92595925 (-)
LP/J MGP_LPJ_G0007489
 lincRNA gene Chr9:97895061-97897415 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007406
 lincRNA gene Chr9:105919380-105921736 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007634
 lincRNA gene Chr9:96749999-96752343 (-)
PWK/PhJ MGP_PWKPhJ_G0007246
 lincRNA gene Chr9:93912874-93915193 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007150
 lincRNA gene Chr9:96805678-96808059 (-)
WSB/EiJ MGP_WSBEiJ_G0007365
 lincRNA gene Chr9:96616943-96619298 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056418 Ensembl Gene Model | MGI Sequence Detail 2571 C57BL/6J ±  kb
transcript ENSMUST00000185694 Ensembl | MGI Sequence Detail 2571 Not Applicable  
polypeptide Q8BQG2 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory