About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823551
Gene symbol: C230086J09Rik
Gene name: RIKEN cDNA C230086J09 gene
Probe: T40472
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015784_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_01
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_01
Specimen euxassay_015784_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_015784_02
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_02
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_02
Specimen euxassay_015784_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_015784_03
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_03
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_03
Specimen euxassay_015784_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_04
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_04
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_04
Specimen euxassay_015784_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_05
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_05
Specimen euxassay_015784_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_06
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_06
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_06
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_06
Specimen euxassay_015784_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_07
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_07
Specimen euxassay_015784_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_08
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_08
Specimen euxassay_015784_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_015784_09
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015784_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_09
Specimen euxassay_015784_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_10
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015784_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015784_10
Specimen euxassay_015784_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015784_11
Specimen euxassay_015784_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_12
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_12
Specimen euxassay_015784_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_13
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_13
Specimen euxassay_015784_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_14
Specimen euxassay_015784_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_15
Specimen euxassay_015784_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_16
Specimen euxassay_015784_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_015784_17
Specimen euxassay_015784_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_015784_18
Specimen euxassay_015784_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_20
Specimen euxassay_015784_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_21
Specimen euxassay_015784_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/24/2024
MGI 6.24 		The Jackson Laboratory