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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827452
Gene symbol: Prrx1
Gene name: paired related homeobox 1
Probe: T38704
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014259_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_01
Specimen euxassay_014259_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_02
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_014259_02
Specimen euxassay_014259_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_03
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_014259_03
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_014259_03
Specimen euxassay_014259_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_04
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_014259_04
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_014259_04
Specimen euxassay_014259_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_014259_05
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_014259_05
Specimen euxassay_014259_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_014259_06
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_014259_06
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_014259_06
Specimen euxassay_014259_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_014259_09
Specimen euxassay_014259_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_014259_10
Specimen euxassay_014259_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_014259_11
Specimen euxassay_014259_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_014259_12
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_014259_12
Specimen euxassay_014259_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_014259_13
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_014259_13
Specimen euxassay_014259_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_014259_18
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_014259_18
Specimen euxassay_014259_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_014259_19
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_014259_19
Specimen euxassay_014259_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_20
TS23: hindlimb digit 3 mesenchyme Weak Regionally restricted euxassay_014259_20
TS23: hindlimb digit 2 mesenchyme Weak Regionally restricted euxassay_014259_20
TS23: hindlimb digit 1 mesenchyme Weak Regionally restricted euxassay_014259_20
Specimen euxassay_014259_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_014259_21
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_21
Specimen euxassay_014259_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_014259_22
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_22
TS23: hand mesenchyme Moderate Regionally restricted euxassay_014259_22
Specimen euxassay_014259_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: middle ear mesenchyme Moderate Regionally restricted euxassay_014259_23
TS23: hand mesenchyme Moderate Regionally restricted euxassay_014259_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
10/09/2024
MGI 6.24 		The Jackson Laboratory