early conceptus |
embryo ectoderm |
embryo endoderm |
embryo mesoderm |
embryo mesenchyme |
extraembryonic component |
alimentary system |
auditory system |
branchial arches |
cardiovascular system |
connective tissue |
endocrine system |
exocrine system |
hemolymphoid system |
integumental system |
limbs |
liver and biliary system |
musculoskeletal system |
nervous system |
olfactory system |
reproductive system |
respiratory system |
urinary system |
visual system |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Transcription Start Site | Location | Distance from Gene 5'-end |
| Tssr25693 | Chr2:113883996-113884043 (-) | -664 bp |
| Tssr25692 | Chr2:113883285-113883299 (-) | 64 bp |
| Tssr25691 | Chr2:113882680-113882684 (-) | 674 bp |
| Tssr25690 | Chr2:113882558-113882568 (-) | 793 bp |
| Tssr25689 | Chr2:113882540-113882552 (-) | 810 bp |
| Tssr25688 | Chr2:113882474-113882508 (-) | 865 bp |
| Tssr25687 | Chr2:113882410-113882463 (-) | 919 bp |
| Tssr25686 | Chr2:113881779-113881793 (-) | 1,570 bp |
| Tssr25685 | Chr2:113881436-113881447 (-) | 1,914 bp |
| Tssr25684 | Chr2:113881066-113881096 (-) | 2,275 bp |
| Tssr25683 | Chr2:113880975-113880978 (-) | 2,379 bp |
| Tssr25682 | Chr2:113880968-113880969 (-) | 2,387 bp |
| Tssr602 | Chr2:113880958-113880961 (-) | 2,396 bp |
| Tssr25681 | Chr2:113880886-113880930 (-) | 2,448 bp |
| Tssr25680 | Chr2:113880839-113880846 (-) | 2,513 bp |
| Tssr25679 | Chr2:113880826-113880835 (-) | 2,525 bp |
| Tssr25678 | Chr2:113880817-113880825 (-) | 2,535 bp |
| Tssr25677 | Chr2:113880145-113880160 (-) | 3,203 bp |
| Tssr25676 | Chr2:113880118-113880135 (-) | 3,229 bp |
| Tssr25675 | Chr2:113880081-113880112 (-) | 3,259 bp |
| Tssr25674 | Chr2:113880033-113880080 (-) | 3,299 bp |
| Tssr25673 | Chr2:113879829-113879834 (-) | 3,524 bp |
| Tssr25672 | Chr2:113879794-113879803 (-) | 3,557 bp |
| Tssr25671 | Chr2:113879725-113879786 (-) | 3,600 bp |
| Tssr25670 | Chr2:113879682-113879723 (-) | 3,653 bp |
| Tssr25669 | Chr2:113878726-113878785 (-) | 4,600 bp |
| Tssr25668 | Chr2:113878697-113878722 (-) | 4,646 bp |
| Tssr25667 | Chr2:113878661-113878695 (-) | 4,678 bp |
| Tssr25666 | Chr2:113878634-113878652 (-) | 4,713 bp |
| Tssr25665 | Chr2:113878067-113878098 (-) | 5,273 bp |
| Tssr601 | Chr2:113878053-113878061 (-) | 5,299 bp |
| Tssr600 | Chr2:113878043-113878050 (-) | 5,309 bp |
| Tssr25664 | Chr2:113877959-113877990 (-) | 5,381 bp |
| Tssr25663 | Chr2:113877929-113877949 (-) | 5,417 bp |
| Tssr25662 | Chr2:113877866-113877923 (-) | 5,461 bp |
| Tssr25661 | Chr2:113877809-113877820 (-) | 5,541 bp |
| Tssr25660 | Chr2:113877792-113877799 (-) | 5,560 bp |
| QTL | Genetic Location* | Genome Location (GRCm39) | Reference | QTL Note |
| Actre2 | Chr2, 57.65 cM | Chr2:80005954-80006113 | J:98595 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states. On mouse Chromosome 2, several candidate genes were identified for Actre2 at 48 cM,Actre3 at 63 cM, Actre4 at 65 cM, and Alcp1 at 37 cM. Candidate genes for Actre2 are Dlx1 (44 cM), Frzb (49.75 cM), D2Ertd391e, and Kai1 (49.6 cM). Candidate genes for Actre3 and Actre4 are Bdnf (62 cM) and Actc1 (64 cM), respectively. Candidate genes forAlcp1 are Pbx3 (22 cM), Hspa5 (22.5 cM), Rprm, Pkp4, and March7 (formerly Axot). |
| Actre3 | Chr2, 68.30 cM | Chr2:112024987-128173821 | J:98595 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states. On mouse Chromosome 2, several candidate genes were identified for Actre2 at 48 cM,Actre3 at 63 cM, Actre4 at 65 cM, and Alcp1 at 37 cM. Candidate genes for Actre2 are Dlx1 (44 cM), Frzb (49.75 cM), D2Ertd391e, and Kai1 (49.6 cM). Candidate genes for Actre3 and Actre4 are Bdnf (62 cM) and Actc1 (64 cM), respectively. Candidate genes forAlcp1 are Pbx3 (22 cM), Hspa5 (22.5 cM), Rprm, Pkp4, and March7 (formerly Axot). |
| Actre4 | Chr2, 59.40 cM | Chr2:112024987-128173821 | J:98595 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states. On mouse Chromosome 2, several candidate genes were identified for Actre2 at 48 cM,Actre3 at 63 cM, Actre4 at 65 cM, and Alcp1 at 37 cM. Candidate genes for Actre2 are Dlx1 (44 cM), Frzb (49.75 cM), D2Ertd391e, and Kai1 (49.6 cM). Candidate genes for Actre3 and Actre4 are Bdnf (62 cM) and Actc1 (64 cM), respectively. Candidate genes forAlcp1 are Pbx3 (22 cM), Hspa5 (22.5 cM), Rprm, Pkp4, and March7 (formerly Axot). |
| Alcp1 | Chr2, 27.37 cM | Chr2:45228128-67838868 | J:98595 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states. On mouse Chromosome 2, several candidate genes were identified for Actre2 at 48 cM,Actre3 at 63 cM, Actre4 at 65 cM, and Alcp1 at 37 cM. Candidate genes for Actre2 are Dlx1 (44 cM), Frzb (49.75 cM), D2Ertd391e, and Kai1 (49.6 cM). Candidate genes for Actre3 and Actre4 are Bdnf (62 cM) and Actc1 (64 cM), respectively. Candidate genes forAlcp1 are Pbx3 (22 cM), Hspa5 (22.5 cM), Rprm, Pkp4, and March7 (formerly Axot). |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 10/29/2024 MGI 6.24 |
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