Sdc4^{tm2a(KOMP)Wtsi}
Targeted Allele Detail

Summary

• Symbol: Sdc4^{tm2a(KOMP)Wtsi}
• Name: syndecan 4; targeted mutation 2a, Wellcome Trust Sanger Institute
• MGI ID: MGI:4451381
• Gene: Sdc4 Location: Chr2:164266167-164285512 bp, - strand Genetic Position: Chr2, 85.16 cM
• Alliance: Sdc4^{tm2a(KOMP)Wtsi} page
• IMPC: Sdc4 gene page

Mutation origin

• Mutant Cell Lines: EPD0504_3_A09, EPD0504_3_B09, EPD0504_3_B11, EPD0504_3_B12, EPD0504_3_C09, EPD0504_3_C10, EPD0504_3_C11, EPD0504_3_D09, EPD0504_3_D10, EPD0504_3_E09, EPD0504_3_E10, EPD0504_3_E11, EPD0504_3_E12, EPD0504_3_F10, EPD0504_3_F11, EPD0504_3_F12, EPD0504_3_G09, EPD0504_3_G11, EPD0504_3_G12, EPD0504_3_H09, EPD0504_3_H10, EPD0504_3_H12
• Germline Transmission: Earliest citation of germline transmission: J:204812
• Parent Cell Line: JM8A3.N1 (ES Cell)
• Strain of Origin: C57BL/6N-A^tm1Brd
• Project Collection: KOMP-CSD

Mutation description

• Allele Type: Targeted (Conditional ready, Null/knockout, Reporter)
• Mutation: Insertion Vector: L1L2_Bact_P
• Mutation details: The L1L2_Bact_P cassette was inserted at position 164270523 of Chromosome 2 upstream of the critical exon(s) (Build GRCm39). The cassette is composed of an FRT site followed by lacZ sequence and a loxP site. This first loxP site is followed by a neomycin resistance gene under the control of the human beta-actin promoter, SV40 polyA, a second FRT site and a second loxP site. A third loxP site is inserted downstream of the targeted exon(s) at position 164271413. The critical exon(s) is/are thus flanked by loxP sites. A "conditional ready" (floxed) allele can be created by flp recombinase expression in mice carrying this allele. Subsequent cre expression results in a knockout mouse. If cre expression occurs without flp expression, a reporter knockout mouse will be created. Further information on targeting strategies used for this and other IKMC alleles can be found at http://www.informatics.jax.org/mgihome/nomen/IKMC_schematics.shtml (J:148605, J:173534)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 2 strains available Cell Lines: 1 line available
• Carrying any Sdc4 Mutation: 30 strains or lines available

References

• Original: J:148605 Wellcome Trust Sanger Institute, Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute. MGI Direct Data Submission. 2009
• All: 3 reference(s)