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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945779
Gene symbol: Atg16l1
Gene name: autophagy related 16 like 1
Probe: g01513
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01513 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g01513_sj_g93_006_e11 , g01513_sj_g93_056_e11
TS19: midbrain Present Widespread g01513_sj_g93_056_e11 , g01513_sj_g93_006_e11
TS19: hindbrain Present Widespread g01513_sj_g93_056_e11 , g01513_sj_g93_006_e11
TS19: future spinal cord Present Widespread g01513_sj_g93_056_e11 , g01513_sj_g93_006_e11
TS19: telencephalon Present Widespread g01513_sj_g93_006_e11 , g01513_sj_g93_056_e11
Specimen g01513 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01513_sj_g94_016_e15 , g01513_sj_g94_116_e15 , g01513_sj_g94_066_e15
TS23: ganglionic eminence Present Widespread g01513_sj_g94_116_e15 , g01513_sj_g94_066_e15 , g01513_sj_g94_016_e15
TS23: hindbrain Present Widespread g01513_sj_g94_116_e15 , g01513_sj_g94_016_e15 , g01513_sj_g94_066_e15
TS23: hippocampus Present Widespread g01513_sj_g94_066_e15 , g01513_sj_g94_016_e15 , g01513_sj_g94_116_e15
TS23: hypothalamus Present Widespread g01513_sj_g94_066_e15 , g01513_sj_g94_016_e15 , g01513_sj_g94_116_e15
TS23: midbrain Present Widespread g01513_sj_g94_016_e15 , g01513_sj_g94_116_e15 , g01513_sj_g94_066_e15
TS23: neocortex Present Widespread g01513_sj_g94_016_e15 , g01513_sj_g94_066_e15 , g01513_sj_g94_116_e15
TS23: main olfactory bulb Present Widespread g01513_sj_g94_016_e15 , g01513_sj_g94_116_e15 , g01513_sj_g94_066_e15
TS23: retina Present Regionally restricted g01513_sj_g94_116_e15 , g01513_sj_g94_016_e15 , g01513_sj_g94_066_e15
TS23: spinal cord Present Regionally restricted g01513_sj_g94_016_e15 , g01513_sj_g94_066_e15 , g01513_sj_g94_116_e15 Expression was region specific and scattered.
Specimen g01513 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01513_sj_g106_102_p7 , g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7
TS28: basal ganglia Present Widespread g01513_sj_g106_052_p7 , g01513_sj_g106_102_p7 , g01513_sj_g106_002_p7
TS28: brainstem Present Widespread g01513_sj_g106_002_p7 , g01513_sj_g106_102_p7 , g01513_sj_g106_052_p7
TS28: cerebellum Present Widespread g01513_sj_g106_052_p7 , g01513_sj_g106_102_p7 , g01513_sj_g106_002_p7
TS28: cerebral cortex Present Widespread g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_102_p7
TS28: choroid plexus Present Regionally restricted g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_102_p7
TS28: hippocampus Present Regionally restricted g01513_sj_g106_102_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_052_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g01513_sj_g106_102_p7 , g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7 Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_102_p7
TS28: midbrain Present Widespread g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_102_p7
TS28: main olfactory bulb Present Widespread g01513_sj_g106_102_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_052_p7
TS28: spinal cord Present Widespread g01513_sj_g106_102_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_052_p7
TS28: thalamus Present Widespread g01513_sj_g106_052_p7 , g01513_sj_g106_102_p7 , g01513_sj_g106_002_p7
TS28: retina Strong Regionally restricted g01513_sj_g106_052_p7 , g01513_sj_g106_002_p7 , g01513_sj_g106_102_p7
Specimen g01513 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01513_sj_g110_038_adc , g01513_sj_g99_005_ads , g01513_sj_g99_055_ads , g01513_sj_g110_088_adc , g01513_sj_g99_105_ads
TS28: basal ganglia Present Widespread g01513_sj_g99_105_ads , g01513_sj_g99_055_ads , g01513_sj_g99_005_ads , g01513_sj_g110_088_adc , g01513_sj_g110_038_adc
TS28: brainstem Present Widespread g01513_sj_g110_038_adc , g01513_sj_g110_088_adc , g01513_sj_g99_005_ads , g01513_sj_g99_105_ads , g01513_sj_g99_055_ads
TS28: cerebellum Present Regionally restricted g01513_sj_g99_055_ads , g01513_sj_g99_105_ads , g01513_sj_g110_038_adc , g01513_sj_g99_005_ads , g01513_sj_g110_088_adc Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g01513_sj_g110_088_adc , g01513_sj_g99_055_ads , g01513_sj_g99_105_ads , g01513_sj_g110_038_adc , g01513_sj_g99_005_ads
TS28: choroid plexus Present Widespread g01513_sj_g110_088_adc , g01513_sj_g110_038_adc , g01513_sj_g99_105_ads , g01513_sj_g99_055_ads , g01513_sj_g99_005_ads
TS28: hippocampus Present Regionally restricted g01513_sj_g99_055_ads , g01513_sj_g110_038_adc , g01513_sj_g99_005_ads , g01513_sj_g110_088_adc , g01513_sj_g99_105_ads Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g01513_sj_g99_105_ads , g01513_sj_g99_005_ads , g01513_sj_g110_088_adc , g01513_sj_g110_038_adc , g01513_sj_g99_055_ads
TS28: midbrain Present Widespread g01513_sj_g110_088_adc , g01513_sj_g110_038_adc , g01513_sj_g99_055_ads , g01513_sj_g99_105_ads , g01513_sj_g99_005_ads
TS28: main olfactory bulb Present Widespread g01513_sj_g99_105_ads , g01513_sj_g99_005_ads , g01513_sj_g99_055_ads , g01513_sj_g110_088_adc , g01513_sj_g110_038_adc
TS28: retina Present Widespread g01513_sj_g99_005_ads , g01513_sj_g99_105_ads , g01513_sj_g99_055_ads , g01513_sj_g110_038_adc , g01513_sj_g110_088_adc
TS28: spinal cord Present Regionally restricted g01513_sj_g99_105_ads , g01513_sj_g99_005_ads , g01513_sj_g110_088_adc , g01513_sj_g110_038_adc , g01513_sj_g99_055_ads Expression was region specific and scattered.
TS28: thalamus Present Widespread g01513_sj_g99_105_ads , g01513_sj_g110_038_adc , g01513_sj_g99_055_ads , g01513_sj_g99_005_ads , g01513_sj_g110_088_adc
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/22/2024
MGI 6.24 		The Jackson Laboratory