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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421251
Gene symbol: Gtf3c2
Gene name: general transcription factor IIIC, polypeptide 2, beta
Probe: MH780 probe 706
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH780; Specimen C1398: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C1398_5_5A
TS22: central nervous system Moderate Regionally restricted Embryo_C1398_5_5A
TS22: telencephalon Moderate Regionally restricted Embryo_C1398_5_5A
TS22: cerebral cortex Moderate Regionally restricted Embryo_C1398_5_5A
TS22: neocortex Moderate Regionally restricted Embryo_C1398_5_5A
TS22: olfactory cortex Weak Regionally restricted Embryo_C1398_5_4A
TS22: main olfactory bulb Weak Regionally restricted Embryo_C1398_5_4A
TS22: piriform cortex Absent
TS22: hippocampus Moderate Regionally restricted Embryo_C1398_5_5A
TS22: basal ganglia Moderate Regionally restricted Embryo_C1398_5_2C
TS22: corpus striatum Moderate Regionally restricted Embryo_C1398_5_2C Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Regionally restricted Embryo_C1398_5_2B
TS22: telencephalon septum Weak Regionally restricted Embryo_C1398_5_5A
TS22: pallidum Weak Regionally restricted Embryo_C1398_5_3C Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Regionally restricted Embryo_C1398_5_3C
TS22: thalamus Weak Regionally restricted Embryo_C1398_5_3C
TS22: hypothalamus Weak Regionally restricted Embryo_C1398_5_3C
TS22: midbrain Moderate Regionally restricted Embryo_C1398_5_2C
TS22: pretectum Weak Regionally restricted Embryo_C1398_5_3B
TS22: superior colliculus Moderate Regionally restricted Embryo_C1398_5_2C
TS22: inferior colliculus Moderate Regionally restricted Embryo_C1398_5_2C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1398_5_2D
TS22: hindbrain Moderate Regionally restricted Embryo_C1398_5_3A
TS22: cerebellum Moderate Regionally restricted Embryo_C1398_5_3A
TS22: pons Weak Regionally restricted Embryo_C1398_5_3C
TS22: medulla oblongata Weak Regionally restricted Embryo_C1398_5_3B
TS22: spinal cord Moderate Regionally restricted Embryo_C1398_5_3B
TS22: choroid plexus Absent
TS22: meninges Weak Regionally restricted Embryo_C1398_5_1B
TS22: peripheral nervous system Weak Regionally restricted Embryo_C1398_5_2B
TS22: cranial ganglion Weak Regionally restricted Embryo_C1398_5_2B
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C1398_5_3A
TS22: eye Moderate Regionally restricted Embryo_C1398_5_1B
TS22: retina Moderate Regionally restricted Embryo_C1398_5_1C
TS22: lens Moderate Regionally restricted Embryo_C1398_5_1B
TS22: cornea Absent
TS22: optic nerve Weak Regionally restricted Embryo_C1398_5_3C
TS22: nose Weak Regionally restricted Embryo_C1398_5_3C
TS22: olfactory epithelium Weak Regionally restricted Embryo_C1398_5_3C
TS22: ear Weak Regionally restricted Embryo_C1398_5_1A
TS22: inner ear Weak Regionally restricted Embryo_C1398_5_1A
TS22: cochlea Weak Regionally restricted Embryo_C1398_5_3A
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C1398_5_1A
TS22: middle ear Weak Regionally restricted Embryo_C1398_5_1A
TS22: alimentary system Moderate Regionally restricted Embryo_C1398_5_3C Expression was detected in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_C1398_5_3A
TS22: salivary gland Moderate Regionally restricted Embryo_C1398_5_3C
TS22: tongue Moderate Regionally restricted Embryo_C1398_5_5C
TS22: tooth Weak Regionally restricted Embryo_C1398_5_5A
TS22: palatal shelf Weak Regionally restricted Embryo_C1398_5_5A
TS22: esophagus Weak Regionally restricted Embryo_C1398_5_3D
TS22: stomach Moderate Regionally restricted Embryo_C1398_5_5B
TS22: liver Weak Regionally restricted Embryo_C1398_5_5A
TS22: respiratory system Moderate Regionally restricted Embryo_C1398_5_2B
TS22: pharynx Weak Regionally restricted Embryo_C1398_5_4B
TS22: larynx Weak Regionally restricted Embryo_C1398_5_4B
TS22: trachea Weak Regionally restricted Embryo_C1398_5_4A
TS22: main bronchus Weak Regionally restricted Embryo_C1398_5_4B
TS22: lung Moderate Regionally restricted Embryo_C1398_5_2B
TS22: urinary system Weak Regionally restricted Embryo_C1398_5_3B Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C1398_5_3D
TS22: ureter Weak Regionally restricted Embryo_C1398_5_2C
TS22: bladder Absent
TS22: urethra Weak Regionally restricted Embryo_C1398_5_3B
TS22: reproductive system Weak Regionally restricted Embryo_C1398_5_3B
TS22: genital tubercle Weak Regionally restricted Embryo_C1398_5_3B
TS22: gonad Absent
TS22: gland Weak Regionally restricted Embryo_C1398_5_3C Expression was weak in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_C1398_5_3C
TS22: pituitary gland Weak Regionally restricted Embryo_C1398_5_4B
TS22: pancreas Weak Regionally restricted Embryo_C1398_5_4C
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_C1398_5_3C Expression was weak in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Weak Regionally restricted Embryo_C1398_5_3C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C1398_5_1B
TS22: face Weak Regionally restricted Embryo_C1398_5_4B Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_C1398_5_4A
TS22: tail Moderate Regionally restricted Embryo_C1398_5_2A
TS22: forelimb Moderate Regionally restricted Embryo_C1398_5_2A
TS22: hindlimb Moderate Regionally restricted Embryo_C1398_5_2A
TS22: integumental system Moderate Regionally restricted Embryo_C1398_5_3C
TS22: skin Moderate Regionally restricted Embryo_C1398_5_2A
TS22: hair Moderate Regionally restricted Embryo_C1398_5_3C
TS22: vibrissa follicle Moderate Regionally restricted Embryo_C1398_5_3C Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/19/2024
MGI 6.24 		The Jackson Laboratory