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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421295
Gene symbol: Llgl1
Gene name: LLGL1 scribble cell polarity complex component
Probe: MH835 probe 741
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH835; Specimen C1406: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C1406_1_4B
TS22: central nervous system Moderate Regionally restricted Embryo_C1406_1_4B
TS22: telencephalon Moderate Regionally restricted Embryo_C1406_1_2C
TS22: cerebral cortex Moderate Regionally restricted Embryo_C1406_1_4C
TS22: neocortex Moderate Regionally restricted Embryo_C1406_1_2C
TS22: olfactory cortex Moderate Regionally restricted Embryo_C1406_1_4C
TS22: main olfactory bulb Moderate Regionally restricted Embryo_C1406_1_4C
TS22: piriform cortex Absent
TS22: hippocampus Moderate Regionally restricted Embryo_C1406_1_2C
TS22: basal ganglia Moderate Regionally restricted Embryo_C1406_1_2C
TS22: corpus striatum Moderate Regionally restricted Embryo_C1406_1_2C Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Weak Regionally restricted Embryo_C1406_1_4B
TS22: pallidum Weak Regionally restricted Embryo_C1406_1_3A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Regionally restricted Embryo_C1406_1_4A
TS22: thalamus Moderate Regionally restricted Embryo_C1406_1_4A
TS22: hypothalamus Moderate Regionally restricted Embryo_C1406_1_4A
TS22: midbrain Moderate Regionally restricted Embryo_C1406_1_4B
TS22: pretectum Moderate Regionally restricted Embryo_C1406_1_4B
TS22: superior colliculus Moderate Regionally restricted Embryo_C1406_1_4B
TS22: inferior colliculus Moderate Regionally restricted Embryo_C1406_1_4B
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1406_1_4A
TS22: hindbrain Moderate Regionally restricted Embryo_C1406_1_4B
TS22: cerebellum Moderate Regionally restricted Embryo_C1406_1_4C
TS22: pons Moderate Regionally restricted Embryo_C1406_1_4B
TS22: medulla oblongata Moderate Regionally restricted Embryo_C1406_1_4B
TS22: spinal cord Moderate Regionally restricted Embryo_C1406_1_3C
TS22: choroid plexus Weak Regionally restricted Embryo_C1406_1_4B
TS22: meninges Weak Regionally restricted Embryo_C1406_1_2B
TS22: peripheral nervous system Weak Regionally restricted Embryo_C1406_1_3A
TS22: cranial ganglion Weak Regionally restricted Embryo_C1406_1_2A
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C1406_1_3A
TS22: eye Weak Regionally restricted Embryo_C1406_1_1A
TS22: retina Weak Regionally restricted Embryo_C1406_1_1A
TS22: lens Absent
TS22: optic nerve Weak Regionally restricted Embryo_C1406_1_2B
TS22: nose Weak Regionally restricted Embryo_C1406_1_2C
TS22: olfactory epithelium Weak Regionally restricted Embryo_C1406_1_2C
TS22: ear Weak Regionally restricted Embryo_C1406_1_3A
TS22: inner ear Weak Regionally restricted Embryo_C1406_1_3A
TS22: cochlea Weak Regionally restricted Embryo_C1406_1_3A
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C1406_1_2A
TS22: middle ear Weak Regionally restricted Embryo_C1406_1_1B
TS22: alimentary system Moderate Regionally restricted Embryo_C1406_1_3B Expression was detected in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1406_1_3B
TS22: salivary gland Weak Regionally restricted Embryo_C1406_1_2B
TS22: tongue Weak Regionally restricted Embryo_C1406_1_4A
TS22: tooth Weak Regionally restricted Embryo_C1406_1_3A
TS22: palatal shelf Weak Regionally restricted Embryo_C1406_1_3A
TS22: esophagus Weak Regionally restricted Embryo_C1406_1_4A
TS22: stomach Weak Regionally restricted Embryo_C1406_1_5C
TS22: liver Absent
TS22: respiratory system Strong Regionally restricted Embryo_C1406_1_2B
TS22: pharynx Weak Regionally restricted Embryo_C1406_1_4B
TS22: larynx Weak Regionally restricted Embryo_C1406_1_4A
TS22: trachea Weak Regionally restricted Embryo_C1406_1_4A
TS22: main bronchus Weak Regionally restricted Embryo_C1406_1_3C
TS22: lung Strong Regionally restricted Embryo_C1406_1_2B
TS22: urinary system Moderate Regionally restricted Embryo_C1406_1_2B Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C1406_1_2B
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_C1406_1_3B
TS22: urethra Weak Regionally restricted Embryo_C1406_1_3B
TS22: reproductive system Weak Regionally restricted Embryo_C1406_1_3A
TS22: genital tubercle Weak Regionally restricted Embryo_C1406_1_3A
TS22: gonad Absent
TS22: gland Moderate Regionally restricted Embryo_C1406_1_4A Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Moderate Regionally restricted Embryo_C1406_1_4A
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Weak Regionally restricted Embryo_C1406_1_4A
TS22: heart Weak Regionally restricted Embryo_C1406_1_4A
TS22: heart atrium Weak Regionally restricted Embryo_C1406_1_4A
TS22: heart ventricle Weak Regionally restricted Embryo_C1406_1_4A
TS22: blood vessel Weak Regionally restricted Embryo_C1406_1_4D
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Weak Regionally restricted Embryo_C1406_1_3A Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Weak Regionally restricted Embryo_C1406_1_3C Expression was weak in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C1406_1_4A
TS22: tail Moderate Regionally restricted Embryo_C1406_1_3A
TS22: forelimb Moderate Regionally restricted Embryo_C1406_1_1B
TS22: hindlimb Moderate Regionally restricted Embryo_C1406_1_1B
TS22: integumental system Moderate Regionally restricted Embryo_C1406_1_3C
TS22: skin Moderate Regionally restricted Embryo_C1406_1_3C
TS22: hair Weak Regionally restricted Embryo_C1406_1_1B
TS22: vibrissa follicle Weak Regionally restricted Embryo_C1406_1_1B Expression was weak in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory