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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421530
Gene symbol: Ncf1
Gene name: neutrophil cytosolic factor 1
Probe: MH1472 probe 1181
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH1472; Specimen C1521: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C1521_2_2A
TS22: central nervous system Moderate Regionally restricted Embryo_C1521_2_2A
TS22: telencephalon Weak Scattered Embryo_C1521_2_3B
TS22: cerebral cortex Weak Scattered Embryo_C1521_2_3B
TS22: neocortex Weak Scattered Embryo_C1521_2_2B
TS22: olfactory cortex Weak Scattered Embryo_C1521_2_3B
TS22: main olfactory bulb Weak Scattered Embryo_C1521_2_3B
TS22: piriform cortex Absent
TS22: hippocampus Weak Scattered Embryo_C1521_2_3B
TS22: basal ganglia Weak Scattered Embryo_C1521_2_2A
TS22: corpus striatum Weak Scattered Embryo_C1521_2_2A Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Scattered Embryo_C1521_2_1D
TS22: telencephalon septum Weak Scattered Embryo_C1521_2_4A
TS22: pallidum Weak Scattered Embryo_C1521_2_3A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Scattered Embryo_C1521_2_4A
TS22: thalamus Weak Scattered Embryo_C1521_2_4A
TS22: hypothalamus Absent
TS22: midbrain Weak Scattered Embryo_C1521_2_4A
TS22: pretectum Absent
TS22: superior colliculus Weak Scattered Embryo_C1521_2_4A
TS22: inferior colliculus Weak Scattered Embryo_C1521_2_4A
TS22: midbrain tegmentum Weak Scattered Embryo_C1521_2_3B
TS22: hindbrain Moderate Scattered Embryo_C1521_2_2A
TS22: cerebellum Weak Scattered Embryo_C1521_2_3B
TS22: pons Moderate Scattered Embryo_C1521_2_2A
TS22: medulla oblongata Weak Scattered Embryo_C1521_2_4C
TS22: spinal cord Moderate Scattered Embryo_C1521_2_3C
TS22: choroid plexus Weak Regionally restricted Embryo_C1521_2_4A
TS22: meninges Moderate Regionally restricted Embryo_C1521_2_1A
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Weak Regionally restricted Embryo_C1521_2_1A
TS22: retina Weak Regionally restricted Embryo_C1521_2_1A
TS22: lens Weak Regionally restricted Embryo_C1521_2_1A
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Weak Regionally restricted Embryo_C1521_2_3B
TS22: inner ear Weak Regionally restricted Embryo_C1521_2_3B
TS22: cochlea Weak Regionally restricted Embryo_C1521_2_3B
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C1521_2_3A Expression was strong in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_C1521_2_3A
TS22: salivary gland Absent
TS22: tongue Weak Regionally restricted Embryo_C1521_2_3A
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Strong Scattered Embryo_C1521_2_3A
TS22: respiratory system Weak Regionally restricted Embryo_C1521_2_5D
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Weak Regionally restricted Embryo_C1521_2_5D
TS22: urinary system Weak Regionally restricted Embryo_C1521_2_3B Expression was weak in the genito-urinary system.
TS22: metanephros Absent
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_C1521_2_4A
TS22: urethra Weak Regionally restricted Embryo_C1521_2_4B
TS22: reproductive system Weak Regionally restricted Embryo_C1521_2_3B
TS22: genital tubercle Weak Regionally restricted Embryo_C1521_2_3B
TS22: gonad Absent
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_C1521_2_4C Expression was weak in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Weak Regionally restricted Embryo_C1521_2_4C
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C1521_2_3A Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Weak Regionally restricted Embryo_C1521_2_2B Expression was weak in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_C1521_2_3B
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C1521_2_6A
TS22: tail Weak Scattered Embryo_C1521_2_5A
TS22: forelimb Moderate Regionally restricted Embryo_C1521_2_2B
TS22: hindlimb Moderate Regionally restricted Embryo_C1521_2_2B
TS22: integumental system Moderate Regionally restricted Embryo_C1521_2_2B
TS22: skin Moderate Regionally restricted Embryo_C1521_2_2B
TS22: hair Weak Regionally restricted Embryo_C1521_2_6A
TS22: vibrissa follicle Weak Regionally restricted Embryo_C1521_2_6A Expression was weak in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/12/2024
MGI 6.24 		The Jackson Laboratory