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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421850
Gene symbol: Ppp2ca
Gene name: protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
Probe: T30770
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH3212; Specimen C4636: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C4636_6_5B
TS22: central nervous system Strong Regionally restricted Embryo_C4636_6_3B
TS22: telencephalon Strong Regionally restricted Embryo_C4636_6_3B
TS22: cerebral cortex Strong Regionally restricted Embryo_C4636_6_3B
TS22: neocortex Moderate Regionally restricted Embryo_C4636_6_2A
TS22: olfactory cortex Strong Regionally restricted Embryo_C4636_6_3B
TS22: main olfactory bulb Strong Regionally restricted Embryo_C4636_6_3B
TS22: piriform cortex Moderate Regionally restricted Embryo_C4636_6_1A
TS22: hippocampus Moderate Regionally restricted Embryo_C4636_6_2A
TS22: basal ganglia Moderate Regionally restricted Embryo_C4636_6_1A
TS22: corpus striatum Moderate Ubiquitous Embryo_C4636_6_1C Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Moderate Regionally restricted Embryo_C4636_6_1A
TS22: telencephalon septum Moderate Ubiquitous Embryo_C4636_6_5A
TS22: pallidum Moderate Ubiquitous Embryo_C4636_6_5A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Ubiquitous Embryo_C4636_6_3C
TS22: thalamus Moderate Ubiquitous Embryo_C4636_6_3C
TS22: hypothalamus Moderate Ubiquitous Embryo_C4636_6_3C
TS22: midbrain Strong Regionally restricted Embryo_C4636_6_3C
TS22: pretectum Moderate Regionally restricted Embryo_C4636_6_3C
TS22: superior colliculus Moderate Ubiquitous Embryo_C4636_6_3C
TS22: inferior colliculus Strong Ubiquitous Embryo_C4636_6_3C
TS22: midbrain tegmentum Moderate Ubiquitous Embryo_C4636_6_3C
TS22: hindbrain Moderate Regionally restricted Embryo_C4636_6_5A
TS22: cerebellum Absent
TS22: pons Moderate Regionally restricted Embryo_C4636_6_5A
TS22: medulla oblongata Moderate Regionally restricted Embryo_C4636_6_5A
TS22: spinal cord Strong Regionally restricted Embryo_C4636_6_3C
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Strong Ubiquitous Embryo_C4636_6_5B
TS22: cranial ganglion Strong Ubiquitous Embryo_C4636_6_5B
TS22: dorsal root ganglion Strong Ubiquitous Embryo_C4636_6_5B
TS22: eye Weak Regionally restricted Embryo_C4636_6_1A
TS22: retina Weak Regionally restricted Embryo_C4636_6_1A
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Weak Regionally restricted Embryo_C4636_6_5A
TS22: olfactory epithelium Weak Regionally restricted Embryo_C4636_6_5A
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Moderate Regionally restricted Embryo_C4636_6_2B Expression was detected in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C4636_6_4B
TS22: salivary gland Moderate Ubiquitous Embryo_C4636_6_2B
TS22: tongue Absent
TS22: tooth Moderate Ubiquitous Embryo_C4636_6_3C
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Absent
TS22: respiratory system Moderate Regionally restricted Embryo_C4636_6_3B
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Ubiquitous Embryo_C4636_6_3B
TS22: urinary system Weak Regionally restricted Embryo_C4636_6_3A Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C4636_6_3A
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_C4636_6_3D Expression was weak in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Weak Ubiquitous Embryo_C4636_6_3D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Ubiquitous Embryo_C4636_6_2B
TS22: face Weak Regionally restricted Embryo_C4636_6_1A Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Absent
TS22: forelimb Weak Regionally restricted Embryo_C4636_6_1A
TS22: hindlimb Weak Regionally restricted Embryo_C4636_6_1A
TS22: integumental system Weak Regionally restricted Embryo_C4636_6_1C
TS22: skin Weak Regionally restricted Embryo_C4636_6_1C
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/12/2024
MGI 6.24 		The Jackson Laboratory