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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423101
Gene symbol: Gch1
Gene name: GTP cyclohydrolase 1
Probe: EB402 probe 354
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EB402; Specimen B382: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_B382_5_1B
TS22: central nervous system Strong Regionally restricted Embryo_B382_5_3C
TS22: telencephalon Strong Regionally restricted Embryo_B382_5_3C
TS22: cerebral cortex Moderate Regionally restricted Embryo_B382_5_3C
TS22: neocortex Moderate Regionally restricted Embryo_B382_5_3C
TS22: olfactory cortex Weak Ubiquitous Embryo_B382_5_3C
TS22: main olfactory bulb Weak Ubiquitous Embryo_B382_5_3C
TS22: piriform cortex Weak Ubiquitous Embryo_B382_5_1C
TS22: hippocampus Moderate Regionally restricted Embryo_B382_5_3C
TS22: basal ganglia Strong Regionally restricted Embryo_B382_5_3C
TS22: corpus striatum Moderate Regionally restricted Embryo_B382_5_2C Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Regionally restricted Embryo_B382_5_2A
TS22: telencephalon septum Moderate Regionally restricted Embryo_B382_5_3C
TS22: pallidum Strong Regionally restricted Embryo_B382_5_3C Expression was strong in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Ubiquitous Embryo_B382_5_3C
TS22: thalamus Weak Ubiquitous Embryo_B382_5_3C
TS22: hypothalamus Weak Ubiquitous Embryo_B382_5_3C
TS22: midbrain Moderate Regionally restricted Embryo_B382_5_3C
TS22: pretectum Weak Ubiquitous Embryo_B382_5_3C
TS22: superior colliculus Moderate Regionally restricted Embryo_B382_5_3C
TS22: inferior colliculus Moderate Ubiquitous Embryo_B382_5_3C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_B382_5_3C
TS22: hindbrain Moderate Regionally restricted Embryo_B382_5_3C
TS22: cerebellum Weak Regionally restricted Embryo_B382_5_3C
TS22: pons Weak Ubiquitous Embryo_B382_5_3C
TS22: medulla oblongata Moderate Regionally restricted Embryo_B382_5_3C
TS22: spinal cord Moderate Regionally restricted Embryo_B382_5_4B
TS22: choroid plexus Moderate Ubiquitous Embryo_B382_5_4B
TS22: meninges Moderate Regionally restricted Embryo_B382_5_4B
TS22: peripheral nervous system Moderate Regionally restricted Embryo_B382_5_3B
TS22: cranial ganglion Weak Ubiquitous Embryo_B382_5_2B
TS22: dorsal root ganglion Moderate Regionally restricted Embryo_B382_5_3B
TS22: eye Strong Regionally restricted Embryo_B382_5_1B
TS22: retina Moderate Regionally restricted Embryo_B382_5_1B
TS22: lens Strong Regionally restricted Embryo_B382_5_1B
TS22: cornea Weak Regionally restricted Embryo_B382_5_1B
TS22: optic nerve Absent
TS22: nose Weak Regionally restricted Embryo_B382_5_3D
TS22: olfactory epithelium Weak Regionally restricted Embryo_B382_5_3D
TS22: ear Moderate Regionally restricted Embryo_B382_5_2D
TS22: inner ear Moderate Regionally restricted Embryo_B382_5_2D
TS22: cochlea Moderate Regionally restricted Embryo_B382_5_5B
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_B382_5_2D
TS22: middle ear Weak Regionally restricted Embryo_B382_5_1A
TS22: alimentary system Strong Regionally restricted Embryo_B382_5_1D Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_B382_5_2C
TS22: salivary gland Moderate Regionally restricted Embryo_B382_5_2A
TS22: tongue Weak Regionally restricted Embryo_B382_5_4B
TS22: tooth Absent
TS22: palatal shelf Moderate Regionally restricted Embryo_B382_5_4B
TS22: esophagus Moderate Regionally restricted Embryo_B382_5_4A
TS22: stomach Strong Regionally restricted Embryo_B382_5_1D
TS22: liver Moderate Ubiquitous Embryo_B382_5_4B
TS22: respiratory system Moderate Regionally restricted Embryo_B382_5_5B
TS22: pharynx Moderate Regionally restricted Embryo_B382_5_4B
TS22: larynx Weak Regionally restricted Embryo_B382_5_4B
TS22: trachea Weak Ubiquitous Embryo_B382_5_4B
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_B382_5_5B
TS22: urinary system Strong Regionally restricted Embryo_B382_5_4A Expression was strong in the genito-urinary system.
TS22: metanephros Moderate Ubiquitous Embryo_B382_5_2D
TS22: ureter Weak Regionally restricted Embryo_B382_5_4A
TS22: bladder Weak Regionally restricted Embryo_B382_5_4A
TS22: urethra Weak Regionally restricted Embryo_B382_5_4A
TS22: reproductive system Strong Regionally restricted Embryo_B382_5_4A
TS22: genital tubercle Strong Regionally restricted Embryo_B382_5_4A
TS22: gonad Absent
TS22: gland Moderate Regionally restricted Embryo_B382_5_3B Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Moderate Regionally restricted Embryo_B382_5_4B
TS22: pancreas Moderate Regionally restricted Embryo_B382_5_3B
TS22: adrenal gland Weak Ubiquitous Embryo_B382_5_3B
TS22: cardiovascular system Moderate Regionally restricted Embryo_B382_5_4B
TS22: heart Moderate Regionally restricted Embryo_B382_5_4B
TS22: heart atrium Moderate Regionally restricted Embryo_B382_5_4B
TS22: heart ventricle Moderate Regionally restricted Embryo_B382_5_4B
TS22: blood vessel Weak Regionally restricted Embryo_B382_5_3D
TS22: hemolymphoid system Moderate Regionally restricted Embryo_B382_5_3D Expression was detected in the immune system.
TS22: spleen primordium Weak Ubiquitous Embryo_B382_5_1D
TS22: thymus primordium Moderate Ubiquitous Embryo_B382_5_3D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Ubiquitous Embryo_B382_5_1C
TS22: face Moderate Ubiquitous Embryo_B382_5_2B Expression was detected in the face/soft tissues.
TS22: facial bone primordium Strong Regionally restricted Embryo_B382_5_3C
TS22: cranium Strong Regionally restricted Embryo_B382_5_2B Expression was strong in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_B382_5_1B
TS22: tail Strong Regionally restricted Embryo_B382_5_3D
TS22: forelimb Strong Regionally restricted Embryo_B382_5_1A
TS22: hindlimb Strong Regionally restricted Embryo_B382_5_1A
TS22: integumental system Strong Regionally restricted Embryo_B382_5_1A
TS22: skin Strong Regionally restricted Embryo_B382_5_1A
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/19/2024
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