MGI QTL GO annotations for Cmn

MGI QTL GO annotations for Cmn_5: cardiac modifier of nmd on chromosome 5

Green arrows indicate "is_a"; Purple arrows indicate "part_of"
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Category	ID	Term	DB Object	Evidence	Reference
Color Key
biological_process	GO:0000245	spliceosome assembly	Srpk2	IDA	MGI:1195449	lightblue
biological_process	GO:0001656	metanephros development	Slit2	IMP	MGI:3043010	palegreen
biological_process	GO:0006350	transcription	Ppargc1a	IEA	MGI:1354194	peachpuff
biological_process	GO:0006355	regulation of transcription, DNA-dependent	Ppargc1a	IEA	MGI:1354194	peachpuff
biological_process	GO:0006397	mRNA processing	Srpk2	IEA	MGI:1354194	lightblue
biological_process	GO:0006468	protein amino acid phosphorylation	Chek2	IEA	MGI:2152098	antiquewhite
biological_process	GO:0006468	protein amino acid phosphorylation	Srpk2	IDA	MGI:1195449	lightblue
biological_process	GO:0006810	transport	Kcnip4	IEA	MGI:1354194	purple1
biological_process	GO:0006811	ion transport	Kcnip4	IEA	MGI:1354194	purple1
biological_process	GO:0006813	potassium ion transport	Kcnip4	IEA	MGI:1354194	purple1
biological_process	GO:0006935	chemotaxis	Slit2	IEA	MGI:1354194	palegreen
biological_process	GO:0007049	cell cycle	Chek2	IEA	MGI:1354194	antiquewhite
biological_process	GO:0007186	G-protein coupled receptor protein signaling pathway	Slit2	IEA	MGI:2152098	palegreen
biological_process	GO:0007243	protein kinase cascade	Srpk2	IDA	MGI:1195449	lightblue
biological_process	GO:0007275	multicellular organismal development	Slit2	IEA	MGI:1354194	palegreen
biological_process	GO:0007399	nervous system development	Slit2	IEA	MGI:1354194	palegreen
biological_process	GO:0007411	axon guidance	Slit2	IDA	MGI:2678272	palegreen
biological_process	GO:0007411	axon guidance	Slit2	IGI	MGI:3041390	palegreen
biological_process	GO:0008380	RNA splicing	Srpk2	IDA	MGI:1195449	lightblue
biological_process	GO:0010332	response to gamma radiation	Chek2	IDA	MGI:3032464	antiquewhite
biological_process	GO:0022904	respiratory electron transport chain	Ppargc1a	IDA	MGI:3032469	peachpuff
biological_process	GO:0030154	cell differentiation	Slit2	IEA	MGI:1354194	palegreen
biological_process	GO:0030154	cell differentiation	Srpk2	IEA	MGI:1354194	lightblue
biological_process	GO:0031290	retinal ganglion cell axon guidance	Slit2	IGI	MGI:2157173	palegreen
biological_process	GO:0042770	DNA damage response, signal transduction	Chek2	IDA	MGI:3032464	antiquewhite
biological_process	GO:0042770	DNA damage response, signal transduction	Chek2	ISO	MGI:2154458	antiquewhite
biological_process	GO:0045941	positive regulation of transcription	Ppargc1a	IDA	MGI:3032469	peachpuff
biological_process	GO:0045941	positive regulation of transcription	Ppargc1a	IDA	MGI:3529655	peachpuff
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Ppargc1a	IGI	MGI:3053497	peachpuff
cellular_component	GO:0005576	extracellular region	Slit2	IEA	MGI:1354194	palegreen
cellular_component	GO:0005615	extracellular space	Slit2	IDA	MGI:2678272	palegreen
cellular_component	GO:0005634	nucleus	Chek2	IEA	MGI:1354194	antiquewhite
cellular_component	GO:0005634	nucleus	Ppargc1a	IC	MGI:3529655	peachpuff
cellular_component	GO:0005634	nucleus	Srpk2	IDA	MGI:1195449	lightblue
cellular_component	GO:0005737	cytoplasm	Srpk2	IDA	MGI:1195449	lightblue
cellular_component	GO:0016020	membrane	Kcnip4	IEA	MGI:1354194	purple1
cellular_component	GO:0016020	membrane	Lhfpl3	IEA	MGI:1354194	gold
cellular_component	GO:0016021	integral to membrane	Lhfpl3	IEA	MGI:1354194	gold
cellular_component	GO:0016021	integral to membrane	Slit2	IEA	MGI:2152098	palegreen
molecular_function	GO:0000166	nucleotide binding	Chek2	IEA	MGI:1354194	antiquewhite
molecular_function	GO:0000166	nucleotide binding	Ppargc1a	IEA	MGI:2152098	peachpuff
molecular_function	GO:0000166	nucleotide binding	Srpk2	IEA	MGI:1354194	lightblue
molecular_function	GO:0000287	magnesium ion binding	Chek2	IEA	MGI:1354194	antiquewhite
molecular_function	GO:0000287	magnesium ion binding	Srpk2	IDA	MGI:1195449	lightblue
molecular_function	GO:0003676	nucleic acid binding	Ppargc1a	IEA	MGI:2152098	peachpuff
molecular_function	GO:0003677	DNA binding	Ppargc1a	IDA	MGI:3529655	peachpuff
molecular_function	GO:0003713	transcription coactivator activity	Ppargc1a	IMP	MGI:3689805	peachpuff
molecular_function	GO:0003723	RNA binding	Ppargc1a	IEA	MGI:1354194	peachpuff
molecular_function	GO:0004672	protein kinase activity	Chek2	IEA	MGI:2152098	antiquewhite
molecular_function	GO:0004672	protein kinase activity	Srpk2	RCA	MGI:3583429	lightblue
molecular_function	GO:0004674	protein serine/threonine kinase activity	Chek2	IEA	MGI:1354194	antiquewhite
molecular_function	GO:0004674	protein serine/threonine kinase activity	Chek2	IEA	MGI:2152098	antiquewhite
molecular_function	GO:0004674	protein serine/threonine kinase activity	Srpk2	IDA	MGI:1195449	lightblue
molecular_function	GO:0004872	receptor activity	Ppargc1a	IEA	MGI:1354194	peachpuff
molecular_function	GO:0004963	follicle-stimulating hormone receptor activity	Slit2	IEA	MGI:2152098	palegreen
molecular_function	GO:0005102	receptor binding	Slit2	TAS	MGI:2678272	palegreen
molecular_function	GO:0005216	ion channel activity	Kcnip4	IEA	MGI:1354194	purple1
molecular_function	GO:0005244	voltage-gated ion channel activity	Kcnip4	IEA	MGI:1354194	purple1
molecular_function	GO:0005267	potassium channel activity	Kcnip4	IEA	MGI:1354194	purple1
molecular_function	GO:0005509	calcium ion binding	Kcnip4	RCA	MGI:2429377	purple1
molecular_function	GO:0005509	calcium ion binding	Slit2	IEA	MGI:2152098	palegreen
molecular_function	GO:0005515	protein binding	Ppargc1a	IPI	MGI:3689757	peachpuff
molecular_function	GO:0005515	protein binding	Slit2	IEA	MGI:2152098	palegreen
molecular_function	GO:0005515	protein binding	Srpk2	IPI	MGI:3687681	lightblue
molecular_function	GO:0005524	ATP binding	Chek2	IEA	MGI:1354194	antiquewhite
molecular_function	GO:0005524	ATP binding	Chek2	IEA	MGI:2152098	antiquewhite
molecular_function	GO:0005524	ATP binding	Srpk2	IDA	MGI:1195449	lightblue
molecular_function	GO:0016301	kinase activity	Chek2	IEA	MGI:1354194	antiquewhite
molecular_function	GO:0016301	kinase activity	Srpk2	IEA	MGI:1354194	lightblue
molecular_function	GO:0016563	transcription activator activity	Ppargc1a	IDA	MGI:3529655	peachpuff
molecular_function	GO:0016740	transferase activity	Chek2	IEA	MGI:1354194	antiquewhite
molecular_function	GO:0016740	transferase activity	Srpk2	IEA	MGI:1354194	lightblue
molecular_function	GO:0030955	potassium ion binding	Kcnip4	IEA	MGI:1354194	purple1
molecular_function	GO:0046872	metal ion binding	Chek2	IEA	MGI:1354194	antiquewhite