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Entr1 Gene Detail
Summary
  • Symbol
    Entr1
  • Name
    endosome associated trafficking regulator 1
  • Synonyms
    C330016H24Rik, C630038K21Rik, Sdccag3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915362
    NCBI Gene: 68112
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:26272814-26279328 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 2, 18.88 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    178 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915362
protein coding gene Chr2:26272810-26279352 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025486
protein coding gene Chr2:24332139-24338653 (-)
A/J MGP_AJ_G0025463
protein coding gene Chr2:23400115-23406629 (-)
AKR/J MGP_AKRJ_G0025433
protein coding gene Chr2:24161930-24168444 (-)
BALB/cJ MGP_BALBcJ_G0025459
protein coding gene Chr2:23508789-23515303 (-)
C3H/HeJ MGP_C3HHeJ_G0025220
protein coding gene Chr2:24121551-24128065 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025903
protein coding gene Chr2:25115837-25122361 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023314
protein coding gene Chr2:22278947-22285502 (-)
CAST/EiJ MGP_CASTEiJ_G0024683
protein coding gene Chr2:23993313-23999826 (-)
CBA/J MGP_CBAJ_G0025198
protein coding gene Chr2:25967027-25973541 (-)
DBA/2J MGP_DBA2J_G0025331
protein coding gene Chr2:23221648-23228162 (-)
FVB/NJ MGP_FVBNJ_G0025293
protein coding gene Chr2:22973303-22979817 (-)
LP/J MGP_LPJ_G0025417
protein coding gene Chr2:24277100-24283614 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025324
protein coding gene Chr2:26116370-26125696 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025962
protein coding gene Chr2:24120145-24126659 (-)
PWK/PhJ MGP_PWKPhJ_G0024431
protein coding gene Chr2:23024605-23031319 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024231
protein coding gene Chr2:24253689-24260219 (-)
WSB/EiJ MGP_WSBEiJ_G0024752
protein coding gene Chr2:24226803-24233317 (-)



Homology
more
  • Human Ortholog
    ENTR1, endosome associated trafficking regulator 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ENTR1, endosome associated trafficking regulator 1
  • Synonyms
    NY-CO-3, SDCCAG3, SDDAG3
  • Links
    NCBI Gene ID: 10807
    neXtProt AC: NX_Q96C92
    UniProt: Q96C92

  • Chr Location
    9q34.3; chr9:136401922-136410614 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    17 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Sequences &
    Gene Models
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    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000026927 Ensembl Gene Model | MGI Sequence Detail 6515 C57BL/6J ±  kb
    transcript ENSMUST00000114102 Ensembl | MGI Sequence Detail 2193 Not Applicable  
    polypeptide ENSMUSP00000109737 Ensembl | MGI Sequence Detail 432 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 10

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1925957, MGI:6192109
    References
    more
    • Summaries
      All 36
      Gene Ontology 6
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    last database update
    11/19/2024
    MGI 6.24
    The Jackson Laboratory