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Catsperb Gene Detail
Summary
  • Symbol
    Catsperb
  • Name
    cation channel sperm associated auxiliary subunit beta
  • Synonyms
    4932415G16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443988
    NCBI Gene: 271036
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:101370912-101592268 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 51.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4923 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443988
 protein coding gene Chr12:101370904-101592268 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0019979
 protein coding gene Chr12:99041355-99255206 (+)
AKR/J MGP_AKRJ_G0019955
 protein coding gene Chr12:101769751-102083452 (+)
BALB/cJ MGP_BALBcJ_G0019965
 protein coding gene Chr12:99402513-99607898 (+)
C3H/HeJ MGP_C3HHeJ_G0019767
 protein coding gene Chr12:102276818-102523538 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020414
 protein coding gene Chr12:106152995-106437888 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019313
 protein coding gene Chr12:97151701-97356929 (+)
CBA/J MGP_CBAJ_G0019739
 protein coding gene Chr12:110079892-110377932 (+)
DBA/2J MGP_DBA2J_G0019850
 protein coding gene Chr12:98519043-98782924 (+)
FVB/NJ MGP_FVBNJ_G0019839
 protein coding gene Chr12:97278876-97503338 (+)
LP/J MGP_LPJ_G0019926
 protein coding gene Chr12:102835804-103084354 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0020443
 protein coding gene Chr12:101371513-101592454 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0019367
 protein coding gene Chr12:102245685-102468624 (+)



Homology
more
  • Human Ortholog
    CATSPERB, cation channel sperm associated auxiliary subunit beta
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CATSPERB, cation channel sperm associated auxiliary subunit beta
  • Synonyms
    C14orf161, CatSper(beta)
  • Links
    NCBI Gene ID: 79820
    neXtProt AC: NX_Q9H7T0
    UniProt: Q9H7T0

  • Chr Location
    14q32.12; chr14:91580696-91780707 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    739
  • Tissues
    18
  • cDNA Data
    9
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047014 Ensembl Gene Model | MGI Sequence Detail 221357 C57BL/6J ±  kb
transcript ENSMUST00000055156 Ensembl | MGI Sequence Detail 3716 Not Applicable  
polypeptide ENSMUSP00000052089 Ensembl | MGI Sequence Detail 1109 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000000672 cation channel sperm-associated auxiliary subunit beta
    (term hierarchy)
  • PDB
    7EEB
  • InterPro Domains
    IPR028748 Cation channel sperm-associated auxiliary subunit beta
    IPR048788 Cation channel sperm-associated auxiliary subunit beta, 2nd domain
    IPR048786 Cation channel sperm-associated auxiliary subunit beta, first domain
    IPR048789 Cation channel sperm-associated protein subunit beta, C-terminal domain
  • GlyGen
    A2RTF1 8 sites, 2 N-linked glycans (2 sites)
Molecular
Reagents
less
  • All nucleic 11
    cDNA 9
    Primer pair 1
    Other 1

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:314092 Lin S, et al., Structure of a mammalian sperm cation channel complex. Nature. 2021 Jul;595(7869):746-750
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory