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Zcchc24 Gene Detail
Summary
  • Symbol
    Zcchc24
  • Name
    zinc finger, CCHC domain containing 24
  • Synonyms
    2310047A01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919168
    NCBI Gene: 71918
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:25712066-25769463 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 15.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1339 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919168
 protein coding gene Chr14:25712066-25769496 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021067
 protein coding gene Chr14:18646144-18697112 (-)
A/J MGP_AJ_G0021016
 protein coding gene Chr14:18190927-18241824 (-)
AKR/J MGP_AKRJ_G0020993
 protein coding gene Chr14:18828233-18880836 (-)
BALB/cJ MGP_BALBcJ_G0021019
 protein coding gene Chr14:18291265-18343165 (-)
C3H/HeJ MGP_C3HHeJ_G0020803
 protein coding gene Chr14:18746242-18807622 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021452
 protein coding gene Chr14:19216964-19274365 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019020
 protein coding gene Chr14:18391022-18442712 (-)
CAST/EiJ MGP_CASTEiJ_G0020327
 protein coding gene Chr14:18624529-18676515 (-)
CBA/J MGP_CBAJ_G0020769
 protein coding gene Chr14:20165108-20219391 (-)
DBA/2J MGP_DBA2J_G0020892
 protein coding gene Chr14:17989698-18044051 (-)
FVB/NJ MGP_FVBNJ_G0020875
 protein coding gene Chr14:17868837-17920079 (-)
LP/J MGP_LPJ_G0020968
 protein coding gene Chr14:18924396-18977977 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020901
 protein coding gene Chr14:19851878-19904956 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021485
 protein coding gene Chr14:18627412-18682362 (-)
PWK/PhJ MGP_PWKPhJ_G0020076
 protein coding gene Chr14:17611489-17663336 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019898
 protein coding gene Chr14:18439189-18501906 (-)
WSB/EiJ MGP_WSBEiJ_G0020383
 protein coding gene Chr14:18617350-18670726 (-)



Homology
more
  • Human Ortholog
    ZCCHC24, zinc finger CCHC-type containing 24
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZCCHC24, zinc finger CCHC-type containing 24
  • Synonyms
    C10orf56, Z3CXXC8
  • Links
    NCBI Gene ID: 219654
    neXtProt AC: NX_Q8N2G6
    UniProt: Q8N2G6

  • Chr Location
    10q22.3; chr10:79382325-79445624 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    69
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055538 Ensembl Gene Model | MGI Sequence Detail 57398 C57BL/6J ±  kb
transcript ENSMUST00000069180 Ensembl | MGI Sequence Detail 4556 Not Applicable  
polypeptide ENSMUSP00000068677 Ensembl | MGI Sequence Detail 241 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000032342 zinc finger CCHC domain-containing protein 24
    (term hierarchy)
  • InterPro Domains
    IPR027377 ZAR1/RTP1-5-like, 3CxxC-type zinc finger
    IPR001878 Zinc finger, CCHC-type
    IPR036875 Zinc finger, CCHC-type superfamily
    IPR033446 Zinc finger domain-containing protein 24, zinc-binding domain
    IPR025829 Zinc knuckle CX2CX3GHX4C
  • GlyGen
    B2RVL6 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 69
    cDNA 69

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:188394 Kang P, et al., Sox9 and NFIA coordinate a transcriptional regulatory cascade during the initiation of gliogenesis. Neuron. 2012 Apr 12;74(1):79-94
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory