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1700001J04Rik Gene Detail
Summary
  • Symbol
    1700001J04Rik
  • Name
    RIKEN cDNA 1700001J04 gene
  • Synonyms
    4930429E18Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919075
    NCBI Gene: 102633312
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:114076264-114077575 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 79.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    168 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919075
 lncRNA gene Chr11:114076264-114077603 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003097
 antisense lncRNA gene Chr11:118042413-118045266 (-)
A/J MGP_AJ_G0003075
 antisense lncRNA gene Chr11:112952577-112953914 (-)
AKR/J MGP_AKRJ_G0003056
 antisense lncRNA gene Chr11:116275725-116277063 (-)
BALB/cJ MGP_BALBcJ_G0003062
 antisense lncRNA gene Chr11:113366019-113367344 (-)
C3H/HeJ MGP_C3HHeJ_G0003018
 antisense lncRNA gene Chr11:116633046-116634311 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003204
 antisense lncRNA gene Chr11:121576342-121579376 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002740
 antisense lncRNA gene Chr11:110026635-110027954 (-)
CAST/EiJ MGP_CASTEiJ_G0002987
 antisense lncRNA gene Chr11:117923275-117924515 (-)
CBA/J MGP_CBAJ_G0003015
 antisense lncRNA gene Chr11:126525174-126526439 (-)
DBA/2J MGP_DBA2J_G0003020
 antisense lncRNA gene Chr11:112389579-112391271 (-)
FVB/NJ MGP_FVBNJ_G0003040
 antisense lncRNA gene Chr11:111867204-111868693 (-)
LP/J MGP_LPJ_G0003095
 antisense lncRNA gene Chr11:118469509-118472200 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003028
 antisense lncRNA gene Chr11:125656183-125657833 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003208
 antisense lncRNA gene Chr11:116942216-116943477 (-)
PWK/PhJ MGP_PWKPhJ_G0002945
 antisense lncRNA gene Chr11:113610134-113612258 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002889
 antisense lncRNA gene Chr11:116747183-116748516 (-)
WSB/EiJ MGP_WSBEiJ_G0003017
 antisense lncRNA gene Chr11:116904096-116906622 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 102633312 NCBI Gene Model | MGI Sequence Detail 1312 C57BL/6J ±  kb
transcript NR_166725 RefSeq | MGI Sequence Detail 826 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
Other
Accession IDs
less
MGI:1925376
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory