Gm20655 Gene Detail

Summary

• Symbol
  Gm20655
• Name
  predicted gene 20655

• Feature Type
  lncRNA gene
• IDs
  MGI:5313102
  NCBI Gene: 102635429
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:17666270-17675669 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 7.23 cM

Strain
Comparison

• SNPs within 2kb
  444 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313102	lncRNA gene	Chr10:17659027-17711349 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002841	antisense lncRNA gene	Chr10:15437241-15446664 (-)
A/J	MGP_AJ_G0002818	antisense lncRNA gene	Chr10:14825269-14834665 (-)
AKR/J	MGP_AKRJ_G0002799	antisense lncRNA gene	Chr10:15055688-15065087 (-)
BALB/cJ	MGP_BALBcJ_G0002805	antisense lncRNA gene	Chr10:14906846-14916234 (-)
C3H/HeJ	MGP_C3HHeJ_G0002763	antisense lncRNA gene	Chr10:15397953-15407365 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002947	antisense lncRNA gene	Chr10:15824715-15834114 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002493	antisense lncRNA gene	Chr10:13767214-13776918 (-)
CAST/EiJ	MGP_CASTEiJ_G0002735	antisense lncRNA gene	Chr10:15207527-15216954 (-)
CBA/J	MGP_CBAJ_G0002758	antisense lncRNA gene	Chr10:16517421-16526819 (-)
DBA/2J	MGP_DBA2J_G0002765	antisense lncRNA gene	Chr10:14732626-14742024 (-)
FVB/NJ	MGP_FVBNJ_G0002785	antisense lncRNA gene	Chr10:14511732-14521160 (-)
LP/J	MGP_LPJ_G0002841	antisense lncRNA gene	Chr10:15238684-15248082 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002775	antisense lncRNA gene	Chr10:16873330-16883878 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002952	antisense lncRNA gene	Chr10:15057493-15066896 (-)
PWK/PhJ	MGP_PWKPhJ_G0002693	antisense lncRNA gene	Chr10:14561449-14571535 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002643	antisense lncRNA gene	Chr10:15205579-15215026 (-)
WSB/EiJ	MGP_WSBEiJ_G0002764	antisense lncRNA gene	Chr10:15125754-15135153 (-)

Homology

• Gene Tree
  Gm20655
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  9

• Ensembl
  ENSMUSG00000093672 (Evidence)
• NCBI Gene
  102635429

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093672	Ensembl Gene Model | MGI Sequence Detail	9400	C57BL/6J
transcript	ENSMUST00000181428	Ensembl | MGI Sequence Detail	2946	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm20655:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96815	Chr10:17675183-17675194 (-)	480 bp