Gm26614 Gene Detail

Summary

• Symbol
  Gm26614
• Name
  predicted gene, 26614

• Feature Type
  lncRNA gene
• IDs
  MGI:5477108
  NCBI Gene: 102635428
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:117702212-117710270 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  376 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477108	lncRNA gene	Chr9:117687464-117710561 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007515	lincRNA gene	Chr9:120546886-120554944 (+)
A/J	MGP_AJ_G0007510	lincRNA gene	Chr9:116080086-116088160 (+)
AKR/J	MGP_AKRJ_G0007482	lincRNA gene	Chr9:119063434-119071505 (+)
BALB/cJ	MGP_BALBcJ_G0007487	lincRNA gene	Chr9:115933765-115941839 (+)
C3H/HeJ	MGP_C3HHeJ_G0007432	lincRNA gene	Chr9:119561956-119570030 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007659	lincRNA gene	Chr9:123832622-123840680 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006840	lincRNA gene	Chr9:113303017-113311288 (+)
CAST/EiJ	MGP_CASTEiJ_G0007336	lincRNA gene	Chr9:119492044-119500111 (+)
CBA/J	MGP_CBAJ_G0007413	lincRNA gene	Chr9:128457365-128465423 (+)
DBA/2J	MGP_DBA2J_G0007439	lincRNA gene	Chr9:115535280-115543338 (+)
FVB/NJ	MGP_FVBNJ_G0007455	lincRNA gene	Chr9:114366345-114374419 (+)
LP/J	MGP_LPJ_G0007520	lincRNA gene	Chr9:120881825-120889883 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007436	lincRNA gene	Chr9:129537864-129545922 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007664	lincRNA gene	Chr9:119441689-119449747 (+)
PWK/PhJ	MGP_PWKPhJ_G0007276	lincRNA gene	Chr9:115905057-115913196 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007181	lincRNA gene	Chr9:119543672-119551737 (+)
WSB/EiJ	MGP_WSBEiJ_G0007396	lincRNA gene	Chr9:119371683-119379759 (+)

Homology

• Gene Tree
  Gm26614
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  3

• Ensembl
  ENSMUSG00000097240 (Evidence)
• NCBI Gene
  102635428

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097240	Ensembl Gene Model | MGI Sequence Detail	8059	C57BL/6J
transcript	ENSMUST00000180386	Ensembl | MGI Sequence Detail	3909	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm26614:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr87605	Chr9:117701291-117701304 (+)	-914 bp