Gm26782 Gene Detail

Summary

• Symbol
  Gm26782
• Name
  predicted gene, 26782

• Feature Type
  lncRNA gene
• IDs
  MGI:5477276
  NCBI Gene: 102640338
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:51107779-51122266 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  378 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477276	lncRNA gene	Chr14:51107679-51122266 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005545	lincRNA gene	Chr14:44824605-44833103 (+)
A/J	MGP_AJ_G0005530	lincRNA gene	Chr14:43486220-43495432 (+)
AKR/J	MGP_AKRJ_G0005509	lincRNA gene	Chr14:45124888-45133386 (+)
BALB/cJ	MGP_BALBcJ_G0005512	lincRNA gene	Chr14:43600697-43609248 (+)
C3H/HeJ	MGP_C3HHeJ_G0005459	lincRNA gene	Chr14:44944989-44955044 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005668	lincRNA gene	Chr14:46651427-46662051 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005038	lincRNA gene	Chr14:42823472-42832328 (+)
CAST/EiJ	MGP_CASTEiJ_G0005402	lincRNA gene	Chr14:42008308-42017603 (+)
CBA/J	MGP_CBAJ_G0005448	lincRNA gene	Chr14:48139788-48149788 (+)
DBA/2J	MGP_DBA2J_G0005464	lincRNA gene	Chr14:43381473-43389783 (+)
FVB/NJ	MGP_FVBNJ_G0005490	lincRNA gene	Chr14:43008836-43017471 (+)
LP/J	MGP_LPJ_G0005548	lincRNA gene	Chr14:45104731-45114308 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005474	lincRNA gene	Chr14:47610591-47619212 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005667	lincRNA gene	Chr14:44616432-44624988 (+)
PWK/PhJ	MGP_PWKPhJ_G0005353	lincRNA gene	Chr14:40279932-40288642 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005271	lincRNA gene	Chr14:40773194-40785134 (+)
WSB/EiJ	MGP_WSBEiJ_G0005452	lincRNA gene	Chr14:44803172-44816996 (+)

Homology

• Gene Tree
  Gm26782
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  6
• Genomic Mutations
  1 involving Gm26782
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  6

• Ensembl
  ENSMUSG00000097431 (Evidence)
• NCBI Gene
  102640338

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097431	Ensembl Gene Model | MGI Sequence Detail	14488	C57BL/6J
transcript	ENSMUST00000246635	Ensembl | MGI Sequence Detail	4967	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm26782:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125373	Chr14:51107812-51107864 (+)	59 bp