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Mir6538 Gene Detail
Summary
  • Symbol
    Mir6538
  • Name
    microRNA 6538
  • Synonyms
    mmu-mir-6538
Location &
Maps
more
  • Sequence Map
    Chr12:26464900-26465009 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5530821
 miRNA gene Chr12:26464900-26465009 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007911
 miRNA gene Chr12:24147687-24147796 (-)
A/J MGP_AJ_G0007905
 miRNA gene Chr12:23518555-23518664 (-)
AKR/J MGP_AKRJ_G0007880
 miRNA gene Chr12:24274337-24274446 (-)
BALB/cJ MGP_BALBcJ_G0007885
 miRNA gene Chr12:23753003-23753112 (-)
C3H/HeJ MGP_C3HHeJ_G0007830
 miRNA gene Chr12:24164724-24164833 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008066
 miRNA gene Chr12:24919174-24919283 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007200
 miRNA gene Chr12:22951790-22951899 (-)
CAST/EiJ MGP_CASTEiJ_G0007723
 miRNA gene Chr12:19145938-19146047 (-)
CBA/J MGP_CBAJ_G0007802
 miRNA gene Chr12:25707151-25707260 (-)
DBA/2J MGP_DBA2J_G0007837
 miRNA gene Chr12:23332020-23332129 (-)
FVB/NJ MGP_FVBNJ_G0007855
 miRNA gene Chr12:23205234-23205343 (-)
LP/J MGP_LPJ_G0007915
 miRNA gene Chr12:24212442-24212551 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007826
 miRNA gene Chr12:25492755-25492864 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008059
 miRNA gene Chr12:23828998-23829107 (-)
PWK/PhJ MGP_PWKPhJ_G0007649
 miRNA gene Chr12:18084408-18084517 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007544
 miRNA gene Chr12:18332572-18332681 (-)
WSB/EiJ MGP_WSBEiJ_G0007791
 miRNA gene Chr12:24016564-24016673 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102466676 NCBI Gene Model | MGI Sequence Detail 110 C57BL/6J ±  kb
transcript NR_105856 RefSeq | MGI Sequence Detail 110 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0022354
References
more
  • Summaries
    All 4
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory