Mir6411 Gene Detail

Summary

• Symbol
  Mir6411
• Name
  microRNA 6411
• Synonyms
  mmu-mir-6411

• Feature Type
  miRNA gene
• IDs
  MGI:5531149
  NCBI Gene: 102465222
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:104123130-104123237 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531149	miRNA gene	Chr10:104123130-104123237 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007751	miRNA gene	Chr10:106349928-106350035 (+)
A/J	MGP_AJ_G0007747	miRNA gene	Chr10:102452824-102452931 (+)
AKR/J	MGP_AKRJ_G0007722	miRNA gene	Chr10:105384976-105385083 (+)
BALB/cJ	MGP_BALBcJ_G0007725	miRNA gene	Chr10:102819310-102819417 (+)
C3H/HeJ	MGP_C3HHeJ_G0007671	miRNA gene	Chr10:105439378-105439485 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007902	miRNA gene	Chr10:110042017-110042124 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007057	miRNA gene	Chr10:97525311-97525418 (+)
CAST/EiJ	MGP_CASTEiJ_G0007566	miRNA gene	Chr10:105528912-105529019 (+)
CBA/J	MGP_CBAJ_G0007644	miRNA gene	Chr10:114258034-114258141 (+)
DBA/2J	MGP_DBA2J_G0007678	miRNA gene	Chr10:101536155-101536262 (+)
FVB/NJ	MGP_FVBNJ_G0007695	miRNA gene	Chr10:100640558-100640665 (+)
LP/J	MGP_LPJ_G0007756	miRNA gene	Chr10:106973209-106973316 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007668	miRNA gene	Chr10:116362474-116362581 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007899	miRNA gene	Chr10:105370548-105370655 (+)
PWK/PhJ	MGP_PWKPhJ_G0007498	miRNA gene	Chr10:101602615-101602722 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007395	miRNA gene	Chr10:104105519-104105619 (+)
WSB/EiJ	MGP_WSBEiJ_G0007633	miRNA gene	Chr10:105481759-105481866 (+)

Homology

• Gene Tree
  Mir6411
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6411
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000099264 (Evidence)
• NCBI Gene
  102465222

Representative Sequences			Length	Strain/Species
genomic	102465222	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	NR_105838	RefSeq | MGI Sequence Detail	108	ZRU/MplStud

Other Database
Links

miRBase

MI0021948

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4