Fau-ps1 Pseudogene Detail

Summary

• Symbol
  Fau-ps1
• Name
  Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), pseudogene 1

• Feature Type
  pseudogene
• IDs
  MGI:103030
  NCBI Gene: 14110
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:141680847-141681312 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 70.21 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_103030	pseudogene	Chr2:141680709-141681312 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011888	pseudogene	Chr2:145830445-145830908 (+)
A/J	MGP_AJ_G0011880	pseudogene	Chr2:139900362-139900831 (+)
AKR/J	MGP_AKRJ_G0011847	pseudogene	Chr2:143939680-143940073 (+)
BALB/cJ	MGP_BALBcJ_G0011857	pseudogene	Chr2:140349402-140349895 (+)
C3H/HeJ	MGP_C3HHeJ_G0011740	pseudogene	Chr2:144471291-144479877 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012159	pseudogene	Chr2:150206739-150207202 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010639	pseudogene	Chr2:134214846-134215422 (+)
CAST/EiJ	MGP_CASTEiJ_G0011529	pseudogene	Chr2:144819536-144820015 (+)
CBA/J	MGP_CBAJ_G0011715	pseudogene	Chr2:155710723-155714228 (+)
DBA/2J	MGP_DBA2J_G0011771	pseudogene	Chr2:139277679-139279245 (+)
FVB/NJ	MGP_FVBNJ_G0011773	pseudogene	Chr2:137802498-137802885 (+)
LP/J	MGP_LPJ_G0011836	pseudogene	Chr2:145988230-145989774 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011778	pseudogene	Chr2:159935987-159936374 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012156	pseudogene	Chr2:143955931-143959766 (+)
PWK/PhJ	MGP_PWKPhJ_G0011375	pseudogene	Chr2:138883301-138884288 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011192	pseudogene	Chr2:143006730-143008131 (+)
WSB/EiJ	MGP_WSBEiJ_G0011546	pseudogene	Chr2:144938420-144938964 (+)

Homology

• Gene Tree
  Fau-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Fau-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082412 (Evidence)
• NCBI Gene
  14110

Representative Sequences			Length	Strain/Species
genomic	14110	NCBI Gene Model | MGI Sequence Detail	466	C57BL/6J

Molecular
Reagents

• All nucleic 2

  Genomic 2

Other
Accession IDs

MGD-MRK-23867, MGI:3649309

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:22828 Casteels D, et al., The mouse Fau gene: genomic structure, chromosomal localization, and characterization of two retropseudogenes. Genomics. 1995 Jan 1;25(1):291-4