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Npn2 Gene Detail
Summary
  • Symbol
    Npn2
  • Name
    neoplastic progression 2
  • Synonyms
    HT/02
  • Feature Type
    lncRNA gene
  • IDs
    MGI:104972
    NCBI Gene: 18153
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:34703607-34703841 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 15.12 cM
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104972
 lncRNA gene Chr6:34703607-34703841 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004251
 antisense lncRNA gene Chr6:32825911-32826145 (-)
A/J MGP_AJ_G0004229
 antisense lncRNA gene Chr6:31418626-31418860 (-)
AKR/J MGP_AKRJ_G0004210
 antisense lncRNA gene Chr6:32488964-32489198 (-)
BALB/cJ MGP_BALBcJ_G0004216
 antisense lncRNA gene Chr6:31599468-31599702 (-)
C3H/HeJ MGP_C3HHeJ_G0004164
 antisense lncRNA gene Chr6:32434369-32434603 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004365
 antisense lncRNA gene Chr6:33650213-33650447 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003838
 antisense lncRNA gene Chr6:29507508-29507741 (-)
CAST/EiJ MGP_CASTEiJ_G0004126
 antisense lncRNA gene Chr6:32259448-32259681 (-)
CBA/J MGP_CBAJ_G0004158
 antisense lncRNA gene Chr6:34943720-34943954 (-)
DBA/2J MGP_DBA2J_G0004174
 antisense lncRNA gene Chr6:31296684-31296918 (-)
FVB/NJ MGP_FVBNJ_G0004190
 antisense lncRNA gene Chr6:31088156-31088390 (-)
LP/J MGP_LPJ_G0004252
 antisense lncRNA gene Chr6:32940620-32940854 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004180
 antisense lncRNA gene Chr6:37273089-37273323 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004362
 antisense lncRNA gene Chr6:32357479-32357713 (-)
PWK/PhJ MGP_PWKPhJ_G0004079
 antisense lncRNA gene Chr6:30908140-30908374 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004023
 antisense lncRNA gene Chr6:32027672-32027905 (-)
WSB/EiJ MGP_WSBEiJ_G0004162
 antisense lncRNA gene Chr6:32286321-32286555 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060411 Ensembl Gene Model | MGI Sequence Detail 235 C57BL/6J ±  kb
transcript ENSMUST00000189275 Ensembl | MGI Sequence Detail 235 Not Applicable  
polypeptide Q61700 UniProt | EBI | MGI Sequence Detail 25 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-31045
References
more
  • Summaries
    All 15
  • Earliest
    J:17020 Sun Y, et al., Molecular cloning of five messenger RNAs differentially expressed in preneoplastic or neoplastic JB6 mouse epidermal cells: one is homologous to human tissue inhibitor of metalloproteinases-3. Cancer Res. 1994 Mar 1;54(5):1139-44
  • Latest
    J:242459 Huettl RE, et al., Engrailed 1 mediates correct formation of limb innervation through two distinct mechanisms. PLoS One. 2015;10(2):e0118505
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory