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Or2c1 Gene Detail
Summary
  • Symbol
    Or2c1
  • Name
    olfactory receptor family 2 subfamily C member 1
  • Synonyms
    GA_x54KRFPKG5P-348087-349025, MOR256-17, Olfr15, OR3
  • Feature Type
    protein coding gene
  • IDs
    MGI:106182
    NCBI Gene: 18312
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:3656839-3657777 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 2.26 cM, cytoband A1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    85 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_106182
 protein coding gene Chr16:3648742-3662611 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022450
 protein coding gene Chr16:278117-279055 (+)
A/J MGP_AJ_G0022411
 protein coding gene Chr16:160941-161879 (+)
AKR/J MGP_AKRJ_G0022388
 protein coding gene Chr16:300968-301906 (+)
BALB/cJ MGP_BALBcJ_G0022416
 protein coding gene Chr16:287985-288923 (+)
C3H/HeJ MGP_C3HHeJ_G0022183
 protein coding gene Chr16:335081-336019 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022865
 protein coding gene Chr16:317918-318856 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020387
 protein coding gene Chr16:112403-113341 (+)
CAST/EiJ MGP_CASTEiJ_G0021710
 protein coding gene Chr16:287639-288577 (+)
CBA/J MGP_CBAJ_G0022152
 protein coding gene Chr16:381287-382225 (+)
DBA/2J MGP_DBA2J_G0022283
 protein coding gene Chr16:268662-269600 (+)
FVB/NJ MGP_FVBNJ_G0022259
 protein coding gene Chr16:240125-241063 (+)
LP/J MGP_LPJ_G0022352
 protein coding gene Chr16:291517-292455 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022281
 protein coding gene Chr16:274083-275021 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022877
 protein coding gene Chr16:264506-265444 (+)
PWK/PhJ MGP_PWKPhJ_G0021450
 protein coding gene Chr16:304195-305133 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021281
 protein coding gene Chr16:368036-368974 (+)
WSB/EiJ MGP_WSBEiJ_G0021759
 protein coding gene Chr16:295579-296517 (+)



Homology
more
  • Human Ortholog
    OR2C1, olfactory receptor family 2 subfamily C member 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR2C1, olfactory receptor family 2 subfamily C member 1
  • Synonyms
    OLFmf3, OR2C2P
  • Links
    NCBI Gene ID: 4993
    neXtProt AC: NX_O95371
    UniProt: O95371

  • Chr Location
    16p13.3; chr16:3322931-3358137 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    752
  • Tissues
    10
  • cDNA Data
    7
  • Literature Summary
    12
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 18312 NCBI Gene Model | MGI Sequence Detail 939 C57BL/6J ±  kb
transcript NM_008762 RefSeq | MGI Sequence Detail 939 Not Specified  
polypeptide P23275 UniProt | EBI | MGI Sequence Detail 312 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    Genomic 2
    cDNA 8
    Primer pair 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-33872, MGI:7276779
References
more
  • Summaries
    All 46
    Developmental Gene Expression 12
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:30467 Nef P, et al., Spatial pattern of receptor expression in the olfactory epithelium. Proc Natl Acad Sci U S A. 1992 Oct 1;89(19):8948-52
  • Latest
    J:297623 Wang YZ, et al., Olig2 regulates terminal differentiation and maturation of peripheral olfactory sensory neurons. Cell Mol Life Sci. 2020 Sep;77(18):3597-3609
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory