D9Wsu149 Pseudogene Detail

Summary

• Symbol
  D9Wsu149
• Name
  DNA segment, Chr 9, Wayne State University 149
• Synonyms
  D9Wsu149e

• Feature Type
  pseudogene
• IDs
  MGI:107281
  NCBI Gene: 28014
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:57390259-57390852 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 31.05 cM
• Mapping Data
  3 experiments

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_107281	pseudogene	Chr9:57390245-57391022 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  D9Wsu149
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000111380 (Evidence)
• NCBI Gene
  28014

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111380	Ensembl Gene Model | MGI Sequence Detail	594	C57BL/6J
transcript	ENSMUST00000214169	Ensembl | MGI Sequence Detail	594	Not Applicable

Other
Accession IDs

MGD-MRK-35746

References

• Summaries
  All 8
• Earliest
  J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
• Latest
  J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49