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Gzmd Gene Detail
Summary
  • Symbol
    Gzmd
  • Name
    granzyme D
  • Synonyms
    CCP5, Ctla-5, Ctla5
  • Feature Type
    protein coding gene
  • IDs
    MGI:109255
    NCBI Gene: 14941
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:56367013-56370060 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 28.19 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    265 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_109255
 protein coding gene Chr14:56367013-56370065 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021386
 protein coding gene Chr14:50204399-50207451 (-)
A/J MGP_AJ_G0021345
 protein coding gene Chr14:49212085-49215132 (-)
AKR/J MGP_AKRJ_G0021321
 protein coding gene Chr14:50964492-50967455 (-)
BALB/cJ MGP_BALBcJ_G0021348
 protein coding gene Chr14:49180724-49183771 (-)
C3H/HeJ MGP_C3HHeJ_G0021129
 protein coding gene Chr14:50648269-50653094 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021788
 protein coding gene Chr14:52722180-52725232 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019330
 protein coding gene Chr14:47426024-47429089 (-)
CAST/EiJ MGP_CASTEiJ_G0020648
 protein coding gene Chr14:46941946-46944060 (-)
CBA/J MGP_CBAJ_G0021096
 protein coding gene Chr14:54270695-54281398 (-)
DBA/2J MGP_DBA2J_G0021215
 protein coding gene Chr14:48916309-48934400 (-)
FVB/NJ MGP_FVBNJ_G0021199
 protein coding gene Chr14:48355789-48358902 (-)
LP/J MGP_LPJ_G0021291
 protein coding gene Chr14:51248412-51251464 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021223
 protein coding gene Chr14:53641400-53644383 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021814
 protein coding gene Chr14:50155823-50177325 (-)
PWK/PhJ MGP_PWKPhJ_G0020391
 protein coding gene Chr14:45454790-45457754 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020221
 protein coding gene Chr14:46205482-46241317 (-)
WSB/EiJ MGP_WSBEiJ_G0020700
 protein coding gene Chr14:50434043-50480742 (-)



Homology
more
  • Human Ortholog
    GZMB, granzyme B
  • Vertebrate Orthologs
    8
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GZMB, granzyme B
  • Synonyms
    C11, CCPI, CGL-1, CGL1, CSP-B, CSPB, CTLA1, CTSGL1, HLP, SECT
  • Links
    NCBI Gene ID: 3002
    neXtProt AC: NX_P10144
    UniProt: P10144

  • Chr Location
    14q12; chr14:24630954-24634267 (-)  GRCh38
  • Human Ortholog
    GZMH, granzyme H
  • Synonyms
    CCP-X, CGL-2, CSP-C, CTLA1, CTSGL2
  • Links
    NCBI Gene ID: 2999
    neXtProt AC: NX_P20718
    UniProt: P20718

  • Chr Location
    14q12; chr14:24606480-24609699 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    710
  • Tissues
    2
  • cDNA Data
    15
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 14941 NCBI Gene Model | MGI Sequence Detail 3048 C57BL/6J ±  kb
transcript NM_010372 RefSeq | MGI Sequence Detail 937 ZRU/MplStud  
polypeptide P11033 UniProt | EBI | MGI Sequence Detail 252 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    Genomic 11
    cDNA 15
    Primer pair 1
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-2235, MGD-MRK-38300
References
more
  • Summaries
    All 41
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:8216 Lobe CG, et al., Cloning of two genes that are specifically expressed in activated cytotoxic T lymphocytes. Proc Natl Acad Sci U S A. 1986 Mar;83(5):1448-52
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory