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Snap23
Gene Detail
 Symbol
Name
ID
Snap23
synaptosomal-associated protein 23
MGI:109356
Synonyms SNAP-23, Sndt, Syndet
Feature Type protein coding gene
Genetic Map
Chromosome 2
60.37 cM, cytoband E5
Detailed Genetic Map ± 1 cM


Mapping data(7)
Sequence Map
Chr2:120567671-120601255 bp, + strand
From VEGA annotation of GRCm38

  33585 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37857  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Snap23

Human
homologs
Human Homolog SNAP23, synaptosomal-associated protein, 23kDa
NCBI Gene ID 8773
neXtProt AC  NX_O00161
Human Synonyms  HsT17016, SNAP-23, SNAP23A, SNAP23B
Human Chr (Location)  15q14; chr15:42495260-42533061 (+)  GRCh38
Alleles
and
phenotypes
All alleles(50) : Gene trapped(45) Targeted(5)
 
Mice homozygous for a knock-out allele exhibit lethality prior to E3.5.
 
Gene Ontology
(GO)
classifications
All GO classifications: (25 annotations)
Process exocytosis, membrane fusion, ...
Component azurophil granule, cell, ...
Function protein binding, SNAP receptor activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
cDNA source data(11)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(15) Genomic(1) cDNA(13) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000015619 (Evidence)
Ensembl Gene ModelENSMUSG00000027287 (Evidence)
Entrez Gene20619 (Evidence)
DFCITC1575721, TC1661259, TC1696251
DoTSDT.101349767, DT.101392911, DT.87069329, DT.94185301, DT.94185306
NIA Mouse Gene IndexU042350, U361075
Consensus CDS ProjectCCDS16622.1, CCDS50681.1
International Mouse Knockout Project StatusSnap23
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015619 VEGA Gene Model | MGI Sequence Detail 33585 C57BL/6J ±  kb
transcript OTTMUST00000037102 VEGA | MGI Sequence Detail 2730 Not Applicable 
polypeptide OTTMUSP00000016634 VEGA | MGI Sequence Detail 221 Not Applicable 

For the selected sequences
All sequences(86) RefSeq(14) UniProt(6)
Polymorphisms RFLP(1) : SNPs within 2kb(167 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000928 SNAP-25
InterPro IPR000727 Target SNARE coiled-coil domain
Protein Ontology PR:000015311 synaptosomal-associated protein 23
References (Earliest) J:38843 Wang G, et al., Syndet is a novel SNAP-25 related protein expressed in many tissues. J Cell Sci. 1997 Feb;110(Pt 4):505-13
(Latest) J:200047 Yatsu A, et al., Syntaxin-3 is required for melanosomal localization of tyrp1 in melanocytes. J Invest Dermatol. 2013 Sep;133(9):2237-46
All references(52)
Other
accession IDs
MGD-MRK-38401, MGI:2138756

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory