Naip1-rs1 Pseudogene Detail

Summary

• Symbol
  Naip1-rs1
• Name
  NLR family, apoptosis inhibitory protein 1, related sequence 1
• Synonyms
  Birc1-rs1

• Feature Type
  pseudogene
• IDs
  MGI:109439
  NCBI Gene: 17941
• Member of
  Naipc cluster
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:100325401-100325663 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 53.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  1
• PCR
  2

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_109439	pseudogene	Chr13:100325401-100325663 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Naip1-rs1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  17941

Representative Sequences			Length	Strain/Species
genomic	17941	NCBI Gene Model | MGI Sequence Detail	263	C57BL/6J

Molecular
Reagents

• All nucleic 8

  Genomic 6

  Primer pair 2

Other
Accession IDs

MGD-MRK-38484

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:37707 Scharf JM, et al., The mouse region syntenic for human spinal muscular atrophy lies within the Lgn1 critical interval and contains multiple copies of Naip exon 5. Genomics. 1996 Dec 15;38(3):405-17
• Latest
  J:222114 Allam R, et al., Epithelial NAIPs protect against colonic tumorigenesis. J Exp Med. 2015 Mar 9;212(3):369-83