Fgfr3-ps Pseudogene Detail

Summary

• Symbol
  Fgfr3-ps
• Name
  fibroblast growth factor receptor 3, pseudogene

• Feature Type
  pseudogene
• IDs
  MGI:109607
  NCBI Gene: 14185
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:180918694-180919830 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 84.53 cM, cytoband H4-H6
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_109607	pseudogene	Chr1:180917691-180921328 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010457	pseudogene	Chr1:187585220-187586356 (+)
A/J	MGP_AJ_G0010444	pseudogene	Chr1:179990978-179992114 (+)
AKR/J	MGP_AKRJ_G0010414	pseudogene	Chr1:185332018-185333154 (+)
BALB/cJ	MGP_BALBcJ_G0010422	pseudogene	Chr1:180625165-180626301 (+)
C3H/HeJ	MGP_C3HHeJ_G0010351	pseudogene	Chr1:186120358-186121494 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010694	pseudogene	Chr1:193676595-193677731 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009370	pseudogene	Chr1:170973654-170974777 (+)
CAST/EiJ	MGP_CASTEiJ_G0010172	pseudogene	Chr1:185462496-185463630 (+)
CBA/J	MGP_CBAJ_G0010319	pseudogene	Chr1:200806705-200807841 (+)
DBA/2J	MGP_DBA2J_G0010350	pseudogene	Chr1:178818455-178819591 (+)
FVB/NJ	MGP_FVBNJ_G0010374	pseudogene	Chr1:176921916-176923010 (+)
LP/J	MGP_LPJ_G0010439	pseudogene	Chr1:188833928-188835064 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010337	pseudogene	Chr1:207971311-207972447 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010664	pseudogene	Chr1:185113512-185114648 (+)
PWK/PhJ	MGP_PWKPhJ_G0010073	pseudogene	Chr1:177940056-177941192 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009888	pseudogene	Chr1:184084414-184085548 (+)
WSB/EiJ	MGP_WSBEiJ_G0010243	pseudogene	Chr1:185322352-185323446 (+)

Homology

• Gene Tree
  Fgfr3-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Fgfr3-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  5
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000103178 (Evidence)
• NCBI Gene
  14185

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103178	Ensembl Gene Model | MGI Sequence Detail	1137	C57BL/6J
transcript	ENSMUST00000195511	Ensembl | MGI Sequence Detail	1137	Not Applicable

Molecular
Reagents

• All nucleic 6

  cDNA 5

  Other 1

  
  

  Microarray probesets 1

Other
Accession IDs

MGD-MRK-39606

References

• Summaries
  All 9

  Developmental Gene Expression 1

  Phenotypes 2
• Earliest
  J:39137 Weil D, et al., Antisense transcription of a murine FGFR-3 psuedogene during fetal developement. Gene. 1997 Mar 10;187(1):115-22
• Latest
  J:44317 Weil D, et al., Predominant expression of murine Bmx tyrosine kinase in the granulo-monocytic lineage. Blood. 1997 Dec 1;90(11):4332-40