About   Help   FAQ
Tex9 Gene Detail
Summary
  • Symbol
    Tex9
  • Name
    testis expressed gene 9
  • Synonyms
    tsec-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1201610
    NCBI Gene: 21778
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:72357676-72399494 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 40.08 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1225 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1201610
 protein coding gene Chr9:72357676-72418226 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035015
 protein coding gene Chr9:72613138-72657648 (-)
A/J MGP_AJ_G0034996
 protein coding gene Chr9:70084482-70126548 (-)
AKR/J MGP_AKRJ_G0034925
 protein coding gene Chr9:71753307-71799362 (-)
BALB/cJ MGP_BALBcJ_G0034988
 protein coding gene Chr9:69792211-69834504 (-)
C3H/HeJ MGP_C3HHeJ_G0034697
 protein coding gene Chr9:72256458-72302645 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035507
 protein coding gene Chr9:74512954-74556677 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032418
 protein coding gene Chr9:69572443-69620150 (-)
CAST/EiJ MGP_CASTEiJ_G0034019
 protein coding gene Chr9:72566075-72612929 (-)
CBA/J MGP_CBAJ_G0034670
 protein coding gene Chr9:77112445-77160757 (-)
DBA/2J MGP_DBA2J_G0034829
 protein coding gene Chr9:69802853-69844805 (-)
FVB/NJ MGP_FVBNJ_G0034771
 protein coding gene Chr9:69114495-69159149 (-)
LP/J MGP_LPJ_G0034910
 protein coding gene Chr9:72817025-72859148 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034812
 protein coding gene Chr9:78186912-78232292 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035529
 protein coding gene Chr9:71898271-71940748 (-)
PWK/PhJ MGP_PWKPhJ_G0033723
 protein coding gene Chr9:70059590-70112283 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033556
 protein coding gene Chr9:72209178-72250294 (-)
WSB/EiJ MGP_WSBEiJ_G0034131
 protein coding gene Chr9:71829088-71877367 (-)



Homology
more
  • Human Ortholog
    TEX9, testis expressed 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TEX9, testis expressed 9
  • Links
    NCBI Gene ID: 374618
    neXtProt AC: NX_Q8N6V9
    UniProt: Q8N6V9

  • Chr Location
    15q21.3; chr15:56243971-56460010 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    745
  • Tissues
    25
  • cDNA Data
    50
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090626 Ensembl Gene Model | MGI Sequence Detail 41819 C57BL/6J ±  kb
transcript ENSMUST00000184125 Ensembl | MGI Sequence Detail 2794 Not Applicable  
polypeptide ENSMUSP00000139026 Ensembl | MGI Sequence Detail 387 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 54
    cDNA 51
    Primer pair 3

    Microarray probesets 5
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:44351 Chen L, et al., Molecular cloning and analysis of novel cDNAs specifically expressed in adult mouse testes. Biochem Biophys Res Commun. 1997 Nov 17;240(2):261-8
  • Latest
    J:141291 Tamplin OJ, et al., Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. BMC Genomics. 2008;9(1):511
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory