About   Help   FAQ
Klra10 Gene Detail
Summary
  • Symbol
    Klra10
  • Name
    killer cell lectin-like receptor subfamily A, member 10
  • Synonyms
    Ly49i2, Ly49J
  • Feature Type
    protein coding gene
  • IDs
    MGI:1321093
    NCBI Gene: 16628
  • Member of
    Klra cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:130246157-130258891 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 63.44 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    510 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1321093
 protein coding gene Chr6:130243330-130260698 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0031341
 protein coding gene Chr6:128850019-128862672 (-)
AKR/J MGP_AKRJ_G0031268
 protein coding gene Chr6:132347849-132361519 (-)
BALB/cJ MGP_BALBcJ_G0031347
 protein coding gene Chr6:128604525-128616662 (-)
C3H/HeJ MGP_C3HHeJ_G0031070
 protein coding gene Chr6:132571489-132584876 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031805
 protein coding gene Chr6:137664278-137695492 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028943
 protein coding gene Chr6:126859929-126871789 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031028
 protein coding gene Chr6:142992470-143007075 (-)
DBA/2J MGP_DBA2J_G0031188
 protein coding gene Chr6:127816973-127829044 (-)
FVB/NJ MGP_FVBNJ_G0031133
 protein coding gene Chr6:126446992-126805683 (-)
LP/J MGP_LPJ_G0031268
 protein coding gene Chr6:134226382-134275288 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031175
 protein coding gene Chr6:146539757-146793052 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031836
 protein coding gene Chr6:132169759-132181665 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072718 Ensembl Gene Model | MGI Sequence Detail 12735 C57BL/6J ±  kb
transcript ENSMUST00000112020 Ensembl | MGI Sequence Detail 823 Not Applicable  
polypeptide ENSMUSP00000107651 Ensembl | MGI Sequence Detail 266 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016187 C-type lectin fold
    IPR001304 C-type lectin-like
    IPR016186 C-type lectin-like/link domain superfamily
    IPR013600 Ly49-like, N-terminal
    IPR052013 Mouse Killer cell lectin-like receptors
    IPR033992 Natural killer cell receptor-like, C-type lectin-like domain
Molecular
Reagents
less
  • All nucleic 6
    Genomic 6

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Gene Ontology 2
  • Earliest
    J:49281 McQueen KL, et al., Localization of five new Ly49 genes, including three closely related to Ly49c. Immunogenetics. 1998 Aug;48(3):174-83
  • Latest
    J:75169 Makrigiannis AP, et al., A BAC Contig Map of the Ly49 Gene Cluster in 129 Mice Reveals Extensive Differences in Gene Content Relative to C57BL/6 Mice. Genomics. 2002 Mar;79(3):437-44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory