Ccl16-ps Pseudogene Detail

Summary

• Symbol
  Ccl16-ps
• Name
  C-C motif chemokine ligand 16, pseudogene
• Synonyms
  HCC-4, lymphocyte and monocyte chemoattactant, NCC-4, Scya16-ps

• Feature Type
  pseudogene
• IDs
  MGI:1341246
  NCBI Gene: 20294
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:83456470-83459954 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 50.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  248 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1341246	pseudogene	Chr11:83456470-83459954 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Ccl16-ps
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  20294

Representative Sequences			Length	Strain/Species
genomic	20294	NCBI Gene Model | MGI Sequence Detail	3485	C57BL/6J

Molecular
Reagents

• All nucleic 2

  Genomic 2

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:76755 IUIS/WHO Subcommittee on Chemokine Nomenclature, Chemokine/chemokine receptor nomenclature. J Immunol Methods. 2002 Apr 1;262(1-2):1-3