About   Help   FAQ
Zim1 Gene Detail
Summary
  • Symbol
    Zim1
  • Name
    zinc finger, imprinted 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1341879
    NCBI Gene: 22776
  • Alliance
    gene page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:6677443-6699521 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 3.87 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    677 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1341879
 protein coding gene Chr7:6674268-6699521 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031613
 protein coding gene Chr7:3763810-3788736 (-)
A/J MGP_AJ_G0031587
 protein coding gene Chr7:3663049-3687963 (-)
AKR/J MGP_AKRJ_G0031514
 protein coding gene Chr7:3906771-3931780 (-)
BALB/cJ MGP_BALBcJ_G0031595
 protein coding gene Chr7:3769867-3795341 (-)
C3H/HeJ MGP_C3HHeJ_G0031316
 protein coding gene Chr7:3746048-3772977 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032058
 protein coding gene Chr7:3975237-4000202 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029171
 protein coding gene Chr7:3346982-3372519 (-)
CAST/EiJ MGP_CASTEiJ_G0030678
 protein coding gene Chr7:3629210-3654177 (-)
CBA/J MGP_CBAJ_G0031273
 protein coding gene Chr7:4117480-4147380 (-)
DBA/2J MGP_DBA2J_G0031431
 protein coding gene Chr7:3695598-3722367 (-)
FVB/NJ MGP_FVBNJ_G0031385
 protein coding gene Chr7:3669903-3694745 (-)
LP/J MGP_LPJ_G0031517
 protein coding gene Chr7:3900649-3926885 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031424
 protein coding gene Chr7:4103040-4129051 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032087
 protein coding gene Chr7:3692676-3718693 (-)
PWK/PhJ MGP_PWKPhJ_G0030405
 protein coding gene Chr7:3849084-3873761 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030232
 protein coding gene Chr7:3280267-3305180 (-)
WSB/EiJ MGP_WSBEiJ_G0030772
 protein coding gene Chr7:3842482-3869261 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    937
  • Tissues
    99
  • cDNA Data
    11
  • Literature Summary
    18
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 22776 NCBI Gene Model | MGI Sequence Detail 22079 C57BL/6J ±  kb
    transcript NM_011769 RefSeq | MGI Sequence Detail 3528 ZRU/MplStud  
    polypeptide NP_035899 RefSeq | MGI Sequence Detail 579 ZRU/MplStud  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 20
      Genomic 4
      cDNA 11
      Primer pair 3
      Other 2

      Microarray probesets 2
    References
    more
    • Summaries
      All 39
      Developmental Gene Expression 18
      Gene Ontology 1
      Phenotypes 5
    • Earliest
      J:54552 Kim J, et al., Zim1, a maternally expressed mouse Kruppel-type zinc-finger gene located in proximal chromosome 7. Hum Mol Genet. 1999 May;8(5):847-54
    • Latest
      J:302583 Jiang W, et al., ZFP57 dictates allelic expression switch of target imprinted genes. Proc Natl Acad Sci U S A. 2021 Feb 2;118(5):e2005377118
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory