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B3galt1 Gene Detail
Summary
  • Symbol
    B3galt1
  • Name
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
  • Synonyms
    6330417G03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1349403
    NCBI Gene: 26877
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:67396215-67953033 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 39.53 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    17277 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1349403
 protein coding gene Chr2:67395528-67953226 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025789
 protein coding gene Chr2:67439296-68024330 (+)
A/J MGP_AJ_G0025766
 protein coding gene Chr2:64834970-65397274 (+)
AKR/J MGP_AKRJ_G0025735
 protein coding gene Chr2:66585763-67169555 (+)
BALB/cJ MGP_BALBcJ_G0025761
 protein coding gene Chr2:65036099-65585765 (+)
C3H/HeJ MGP_C3HHeJ_G0025521
 protein coding gene Chr2:66798592-67389289 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026208
 protein coding gene Chr2:69461818-70070816 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023611
 protein coding gene Chr2:62118820-62669831 (+)
CAST/EiJ MGP_CASTEiJ_G0024985
 protein coding gene Chr2:66896744-67490166 (+)
CBA/J MGP_CBAJ_G0025501
 protein coding gene Chr2:72033096-72634370 (+)
DBA/2J MGP_DBA2J_G0025632
 protein coding gene Chr2:64498551-65057539 (+)
FVB/NJ MGP_FVBNJ_G0025595
 protein coding gene Chr2:63878031-64429779 (+)
LP/J MGP_LPJ_G0025721
 protein coding gene Chr2:67294789-67877076 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025624
 protein coding gene Chr2:74089804-74722982 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026265
 protein coding gene Chr2:66655135-67234101 (+)
PWK/PhJ MGP_PWKPhJ_G0024726
 protein coding gene Chr2:64302688-64875880 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024533
 protein coding gene Chr2:66838722-67451503 (+)
WSB/EiJ MGP_WSBEiJ_G0025053
 protein coding gene Chr2:67076769-67667075 (+)



Homology
more
  • Human Ortholog
    B3GALT1, beta-1,3-galactosyltransferase 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    B3GALT1, beta-1,3-galactosyltransferase 1
  • Synonyms
    beta3Gal-T1
  • Links
    NCBI Gene ID: 8708
    neXtProt AC: NX_Q9Y5Z6
    UniProt: Q9Y5Z6

  • Chr Location
    2q24.3; chr2:167293001-167874045 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    836
  • Tissues
    108
  • cDNA Data
    9
  • Literature Summary
    3
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034780 Ensembl Gene Model | MGI Sequence Detail 556819 C57BL/6J ±  kb
transcript ENSMUST00000042456 Ensembl | MGI Sequence Detail 2855 Not Applicable  
polypeptide ENSMUSP00000041343 Ensembl | MGI Sequence Detail 326 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 9
    Primer pair 2

    Microarray probesets 8
Other
Accession IDs
less
MGI:1918005
References
more
  • Summaries
    All 38
    Developmental Gene Expression 3
    Gene Ontology 9
    Phenotypes 8
  • Earliest
    J:45045 Hennet T, et al., Genomic cloning and expression of three murine UDP-galactose: beta-N-acetylglucosamine beta1,3-galactosyltransferase genes. J Biol Chem. 1998 Jan 2;273(1):58-65
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory