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Snord35a Gene Detail
Summary
  • Symbol
    Snord35a
  • Name
    small nucleolar RNA, C/D box 35A
  • Synonyms
    Rnu35a, U35, U35A
  • Feature Type
    snoRNA gene
  • IDs
    MGI:1351319
    NCBI Gene: 27211
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:44775771-44775859 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 29.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1351319
 snoRNA gene Chr7:44775770-44775859 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039375
 snoRNA gene Chr7:45361624-45361713 (-)
A/J MGP_AJ_G0039373
 snoRNA gene Chr7:44498986-44499075 (-)
AKR/J MGP_AKRJ_G0039299
 snoRNA gene Chr7:45728538-45728627 (-)
BALB/cJ MGP_BALBcJ_G0039353
 snoRNA gene Chr7:44497540-44497629 (-)
C3H/HeJ MGP_C3HHeJ_G0039014
 snoRNA gene Chr7:46224957-46225046 (-)
C57BL/6NJ MGP_C57BL6NJ_G0039901
 snoRNA gene Chr7:47631242-47631331 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036576
 snoRNA gene Chr7:47062585-47062674 (-)
CAST/EiJ MGP_CASTEiJ_G0038146
 snoRNA gene Chr7:37608724-37608813 (-)
CBA/J MGP_CBAJ_G0038983
 snoRNA gene Chr7:49187618-49187707 (-)
DBA/2J MGP_DBA2J_G0039171
 snoRNA gene Chr7:44168767-44168856 (-)
FVB/NJ MGP_FVBNJ_G0039127
 snoRNA gene Chr7:43947232-43947321 (-)
LP/J MGP_LPJ_G0039216
 snoRNA gene Chr7:46042878-46042967 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039131
 snoRNA gene Chr7:47906678-47906767 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040001
 snoRNA gene Chr7:44944885-44944974 (-)
PWK/PhJ MGP_PWKPhJ_G0037819
 snoRNA gene Chr7:37535481-37535570 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037577
 snoRNA gene Chr7:32957893-32957982 (-)
WSB/EiJ MGP_WSBEiJ_G0038373
 snoRNA gene Chr7:45435215-45435304 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 27211 NCBI Gene Model | MGI Sequence Detail 89 C57BL/6J ±  kb
transcript NR_000003 RefSeq | MGI Sequence Detail 89 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:16297 Morry MJ, et al., Modulation of transcriptional activity and stable complex formation by 5'-flanking regions of mouse tRNAHis genes. Mol Cell Biol. 1986 Jan;6(1):105-15
  • Latest
    J:237822 Lee J, et al., Rpl13a small nucleolar RNAs regulate systemic glucose metabolism. J Clin Invest. 2016 Dec 01;126(12):4616-4625
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory